RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 TBRG1Q3YBR2 411 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 PLEKHN1Q494U1 663 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-215ENST00000641371 CLVS2Q5SYC1 327 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 ZNF57Q68EA5 555 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-215ENST00000641371 ZNF324BQ6AW86 544 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-215ENST00000641371 RTL6Q6ICC9 239 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 ASPHD2Q6ICH7 369 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 ZNF585AQ6P3V2 769 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 KRT74Q7RTS7 529 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 TOMM5Q8N4H5 51 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 OR51D1Q8NGF3 324 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 OR13C9Q8NGT0 318 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 KCNG3Q8TAE7 436 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 FAM57AQ8TBR7 257 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 FCAMRQ8WWV6 532 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 HTRA1Q92743 480 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 PIGTQ969N2 578 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 FAM46BQ96A09 425 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 SLC25A28Q96A46 364 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 SGK3Q96BR1 496 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 ORAI1Q96D31 301 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 S100A13Q99584 98 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 URM1Q9BTM9 101 aaKnown RBP8.47□□□□□ -1.05
PHGDH-215ENST00000641371 CST11Q9H112 138 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 TP63Q9H3D4 680 aaPredicted RBP8.47□□□□□ -1.05
PHGDH-215ENST00000641371 OCEL1Q9H607 264 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 C12orf49Q9H741 205 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 ZNF319Q9P2F9 582 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 EIF3KQ9UBQ5 218 aaKnown RBP8.47□□□□□ -1.05
PHGDH-215ENST00000641371 KCNN3Q9UGI6 736 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 PRSS50Q9UI38 385 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 TBC1D24Q9ULP9 559 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 SLC7A11Q9UPY5 501 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 PIGLQ9Y2B2 252 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 TP53TG5Q9Y2B4 290 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 AMDHD2Q9Y303 409 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 NOP16Q9Y3C1 178 aaKnown RBP8.47□□□□□ -1.05
PHGDH-215ENST00000641371 N6AMT1Q9Y5N5 214 aa8.47□□□□□ -1.05
PHGDH-215ENST00000641371 TMEM272A0A1B0GTI8 110 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 hCG_38984A0A1B0GV85 526 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 H3BUI4 141 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 LDLRAD4O15165 306 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 LYRM1O43325 122 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 ZNF780AO75290 641 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-215ENST00000641371 CTAG2O75638 210 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 ADRB1P08588 477 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 DBHP09172 617 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 TMIGD3P0DMS9 266 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-215ENST00000641371 ABOP16442 354 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 SELEP16581 610 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 CDK2P24941 298 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 KIR2DL2P43627 348 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-215ENST00000641371 CLDN12P56749 244 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 TAS2R20P59543 309 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 ACTBP60709 375 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 ACTG1P63261 375 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 GFOD2Q3B7J2 385 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 C3orf36Q3SXR2 165 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 TMEM42Q69YG0 159 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 AWAT2Q6E213 333 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 PLET1Q6UQ28 207 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 CCBE1Q6UXH8 406 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-215ENST00000641371 MRPL21Q7Z2W9 205 aaKnown RBP8.46□□□□□ -1.06
PHGDH-215ENST00000641371 OR5AS1Q8N127 324 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 CNEP1R1Q8N9A8 125 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 C9orf106Q8NAJ2 232 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 DUSP18Q8NEJ0 188 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 STEAP2Q8NFT2 490 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 OR51A2Q8NGJ7 313 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 TRIM63Q969Q1 353 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 POM121L2Q96KW2 1035 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 LYZL4Q96KX0 146 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 ABHD1Q96SE0 405 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 GPER1Q99527 375 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 PIGMQ9H3S5 423 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 CNTD2Q9H8S5 307 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 B3GNT2Q9NY97 397 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 ZNF224Q9NZL3 707 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 NPAP1Q9NZP6 1156 aa8.46□□□□□ -1.06
PHGDH-215ENST00000641371 MRPS28Q9Y2Q9 187 aaKnown RBP8.46□□□□□ -1.06
PHGDH-215ENST00000641371 MRPS7Q9Y2R9 242 aaKnown RBP8.46□□□□□ -1.06
PHGDH-215ENST00000641371 A0A096LPE4 126 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 A0A0B4J203 849 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 FAM240BA0A1B0GVZ2 78 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 A0A1W2PPZ6 126 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 TMEM8BA6NDV4 472 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 PRSS44E7EML9 344 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 H3BSH0 61 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 EEF1E1O43324 174 aaKnown RBP8.45□□□□□ -1.06
PHGDH-215ENST00000641371 RBBP9O75884 186 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 HLA-HP01893 362 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 PDGFAP04085 211 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 CSF1P09603 554 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 CBR1P16152 277 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 IGHV1-2P23083 117 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 OPRM1P35372 400 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 BCAP31P51572 246 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 FUT6P51993 359 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 RAG2P55895 527 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 GABRA6Q16445 453 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms