RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 REEP6Q96HR9 211 aa3□□□□□ -1.93
LIG4-205ENST00000614526 RADILQ96JH8 1075 aa3□□□□□ -1.93
LIG4-205ENST00000614526 TAAR6Q96RI8 345 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SCNM1Q9BWG6 230 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SELENOIQ9C0D9 397 aa3□□□□□ -1.93
LIG4-205ENST00000614526 OR2H1Q9GZK4 316 aa3□□□□□ -1.93
LIG4-205ENST00000614526 WNT5BQ9H1J7 359 aa3□□□□□ -1.93
LIG4-205ENST00000614526 NOX3Q9HBY0 568 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SH3BGRL2Q9UJC5 107 aa3□□□□□ -1.93
LIG4-205ENST00000614526 TIMM10BQ9Y5J6 103 aa3□□□□□ -1.93
LIG4-205ENST00000614526 POLEQ07864 2286 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SYNGR3O43761 229 aa3□□□□□ -1.93
LIG4-205ENST00000614526 CRTAPO75718 401 aaPredicted RBP3□□□□□ -1.93
LIG4-205ENST00000614526 RAD51DO75771 328 aa3□□□□□ -1.93
LIG4-205ENST00000614526 RBBP9O75884 186 aa3□□□□□ -1.93
LIG4-205ENST00000614526 NGFP01138 241 aa3□□□□□ -1.93
LIG4-205ENST00000614526 CD3DP04234 171 aa3□□□□□ -1.93
LIG4-205ENST00000614526 TCRBP04435 133 aa3□□□□□ -1.93
LIG4-205ENST00000614526 VSIG8P0DPA2 414 aa3□□□□□ -1.93
LIG4-205ENST00000614526 GTF2F2P13984 249 aa3□□□□□ -1.93
LIG4-205ENST00000614526 CD82P27701 267 aa3□□□□□ -1.93
LIG4-205ENST00000614526 RAB1AP62820 205 aa3□□□□□ -1.93
LIG4-205ENST00000614526 ZNF92Q03936 586 aa3□□□□□ -1.93
LIG4-205ENST00000614526 UNC119Q13432 240 aa3□□□□□ -1.93
LIG4-205ENST00000614526 KCNMB1Q16558 191 aa3□□□□□ -1.93
LIG4-205ENST00000614526 OR52W1Q6IF63 320 aa3□□□□□ -1.93
LIG4-205ENST00000614526 ANKRD16Q6P6B7 361 aa3□□□□□ -1.93
LIG4-205ENST00000614526 CD163Q86VB7 1156 aa3□□□□□ -1.93
LIG4-205ENST00000614526 OR5AS1Q8N127 324 aa3□□□□□ -1.93
LIG4-205ENST00000614526 PAQR4Q8N4S7 273 aaPredicted RBP3□□□□□ -1.93
LIG4-205ENST00000614526 OR6M1Q8NGM8 313 aa3□□□□□ -1.93
LIG4-205ENST00000614526 OR14K1Q8NGZ2 314 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SNIP1Q8TAD8 396 aaKnown RBP3□□□□□ -1.93
LIG4-205ENST00000614526 RAB40AQ8WXH6 277 aa3□□□□□ -1.93
LIG4-205ENST00000614526 MAFIPQ8WZ33 124 aa3□□□□□ -1.93
LIG4-205ENST00000614526 SORCS2Q96PQ0 1159 aa3□□□□□ -1.93
LIG4-205ENST00000614526 NEK6Q9HC98 313 aa3□□□□□ -1.93
LIG4-205ENST00000614526 HRASLSQ9HDD0 168 aa3□□□□□ -1.93
LIG4-205ENST00000614526 ZNF581Q9P0T4 197 aa3□□□□□ -1.93
LIG4-205ENST00000614526 MRPS28Q9Y2Q9 187 aaKnown RBP3□□□□□ -1.93
LIG4-205ENST00000614526 COL6A6A6NMZ7 2263 aa3□□□□□ -1.93
LIG4-205ENST00000614526 PTPRQQ9UMZ3 2332 aa3□□□□□ -1.93
LIG4-205ENST00000614526 MED12LQ86YW9 2145 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 A0A0A6YYJ9 748 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 MEGF11A6BM72 1044 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 ZNF891A8MT65 544 aaPredicted RBP2.99□□□□□ -1.93
LIG4-205ENST00000614526 GABARAPH6UMI1 98 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 ARPC1BO15143 372 aaKnown RBP2.99□□□□□ -1.93
LIG4-205ENST00000614526 SOCS1O15524 211 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 XRCC3O43542 346 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 DNPH1O43598 174 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 SULT1B1O43704 296 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 RLN1P04808 185 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 FAM157BP0CG42 384 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 TMEM225BP0DP42 221 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 SLC6A1P30531 599 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 PRSS3P35030 304 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 GMFBP60983 142 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 UBE2MP61081 183 aaKnown RBP2.99□□□□□ -1.93
LIG4-205ENST00000614526 SCRN3Q0VDG4 424 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 RIN1Q13671 783 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 KLF9Q13886 244 aaPredicted RBP2.99□□□□□ -1.93
LIG4-205ENST00000614526 KISS1Q15726 138 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 CDNFQ49AH0 187 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 ATAD3CQ5T2N8 411 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 DOK3Q7L591 496 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 RPRMLQ8N4K4 120 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 DRAXINQ8NBI3 349 aaPredicted RBP2.99□□□□□ -1.93
LIG4-205ENST00000614526 TNFAIP8L1Q8WVP5 186 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 OR10A2Q9H208 303 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 DPAGT1Q9H3H5 408 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 PARPBPQ9NWS1 579 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 ZNF224Q9NZL3 707 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 EMC3Q9P0I2 261 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 MRPS18CQ9Y3D5 142 aaKnown RBP2.99□□□□□ -1.93
LIG4-205ENST00000614526 TRAV17A0A0B4J275 112 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 CIB4A0PJX0 185 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 WIPF3A6NGB9 483 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 DHRS3O75911 302 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 AGFG2O95081 481 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 HPXP02790 462 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 CELA3BP08861 270 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 CST2P09228 141 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 ANXA7P20073 488 aaKnown RBP2.99□□□□□ -1.93
LIG4-205ENST00000614526 GABRR1P24046 479 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 MTCP1P56278 107 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 PER3P56645 1201 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 FOXF2Q12947 444 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 RAB35Q15286 201 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 STK11Q15831 433 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 LINC00303Q3SY05 128 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 SCGB2B2Q4G0G5 96 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 PLA1AQ53H76 456 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 NKAPLQ5M9Q1 402 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 FAM166AQ6J272 317 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 VWA1Q6PCB0 445 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 ZNF782Q6ZMW2 699 aaPredicted RBP2.99□□□□□ -1.93
LIG4-205ENST00000614526 Q6ZTK2 550 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 MOB3CQ70IA8 216 aa2.99□□□□□ -1.93
LIG4-205ENST00000614526 FGD2Q7Z6J4 655 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms