RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 LRRC29Q8WV35 223 aa8.71□□□□□ -1.02
CHMP2A-202ENST00000596708 CMTM5Q96DZ9 223 aa8.71□□□□□ -1.02
CHMP2A-202ENST00000596708 CCL13Q99616 98 aa8.71□□□□□ -1.02
CHMP2A-202ENST00000596708 KCNJ15Q99712 375 aa8.71□□□□□ -1.02
CHMP2A-202ENST00000596708 EGLN3Q9H6Z9 239 aa8.71□□□□□ -1.02
CHMP2A-202ENST00000596708 GORASP2Q9H8Y8 452 aa8.71□□□□□ -1.02
CHMP2A-202ENST00000596708 SPAG4Q9NPE6 437 aa8.71□□□□□ -1.02
CHMP2A-202ENST00000596708 SIRT7Q9NRC8 400 aa8.71□□□□□ -1.02
CHMP2A-202ENST00000596708 KAAG1Q9UBP8 84 aa8.71□□□□□ -1.02
CHMP2A-202ENST00000596708 DNAJB11Q9UBS4 358 aa8.71□□□□□ -1.02
CHMP2A-202ENST00000596708 RPUSD1Q9UJJ7 312 aaKnown RBP8.71□□□□□ -1.02
CHMP2A-202ENST00000596708 KPTNQ9Y664 436 aa8.71□□□□□ -1.02
CHMP2A-202ENST00000596708 A0A1B0GW55 424 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 A0A1W2PRD5 423 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 A0A1W2PRF3 423 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 A0A1W2PRM7 423 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 SLC22A31A6NKX4 558 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 NDUFB3O43676 98 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 FCN3O75636 299 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 FABP3P05413 133 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 ANXA2P07355 339 aaKnown RBP8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 FBP1P09467 338 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 DUX4L2P0CJ85 424 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 DUX4L3P0CJ86 424 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 DUX4L4P0CJ87 422 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 DUX4L5P0CJ88 424 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 DUX4L6P0CJ89 424 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 DUX4L7P0CJ90 424 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 MUC1P15941 1255 aaPredicted RBP8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 EEF1B2P24534 225 aaKnown RBP8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 FMO3P31513 532 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 OTX1P32242 354 aaPredicted RBP8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 DDOSTP39656 456 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 ELF3P78545 371 aaPredicted RBP8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 TSPAN31Q12999 210 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 PCK2Q16822 640 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 TIGD6Q17RP2 521 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 DUX4L9Q6RFH8 374 aaPredicted RBP8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 ZDHHC21Q8IVQ6 265 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 CMTM4Q8IZR5 234 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 PIP4P2Q8N4L2 257 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 ZSCAN4Q8NAM6 433 aaPredicted RBP8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 ZNRF4Q8WWF5 429 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 SLAMF6Q96DU3 332 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 SEMA6AQ9H2E6 1030 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 CCDC134Q9H6E4 229 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 OPA3Q9H6K4 179 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 RNPEPL1Q9HAU8 725 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 DUX4Q9UBX2 424 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 COMMD3-BMI1R4GMX3 469 aa8.7□□□□□ -1.02
CHMP2A-202ENST00000596708 ANKRD61A6NGH8 418 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 ZNF878C9JN71 531 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 ZNF593O00488 134 aaPredicted RBP8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 TSPAN15O95858 294 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 SEMG1P04279 462 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 GYPBP06028 91 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 PSKH1P11801 424 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 HSD11B1P28845 292 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 MSX2P35548 267 aaPredicted RBP8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 NAA10P41227 235 aaPredicted RBP8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 SLC15A1P46059 708 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 ENTPD1P49961 510 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 GMFBP60983 142 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 GUCA2AQ02747 115 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 PRB3Q04118 309 aaPredicted RBP8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 IKZF1Q13422 519 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 WDR38Q5JTN6 314 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 RPL13AP3Q6NVV1 102 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 PGBD2Q6P3X8 592 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 C11orf53Q8IXP5 236 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 ZNF511Q8NB15 262 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 SLC37A3Q8NCC5 494 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 OR1M1Q8NGA1 313 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 OR5T2Q8NGG2 359 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 OR9Q1Q8NGQ5 310 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 NPRL2Q8WTW4 380 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 H1FXQ92522 213 aaKnown RBP8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 NSMCE2Q96MF7 247 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 DDOQ99489 341 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 C16orf95Q9H693 158 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 SP140LQ9H930 580 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 MAGEL2Q9UJ55 1249 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 CDH10Q9Y6N8 788 aa8.69□□□□□ -1.02
CHMP2A-202ENST00000596708 NOTCH1P46531 2555 aa8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 ZNF816-ZNF321PA0A0X1KG74 233 aa8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 ACOT8O14734 319 aa8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 PAHP00439 452 aa8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 CSF1P09603 554 aa8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 TGFBR2P37173 567 aa8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 GNALP38405 381 aa8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 CX3CR1P49238 355 aa8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 DLX1P56177 255 aa8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 GRB2P62993 217 aaKnown RBP8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 CSNK2BP67870 215 aa8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 FAM3AP98173 230 aa8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 EIF2B1Q14232 305 aaKnown RBP8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 C2orf68Q2NKX9 166 aa8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 GFOD2Q3B7J2 385 aa8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 LRRC10Q5BKY1 277 aa8.68□□□□□ -1.02
CHMP2A-202ENST00000596708 METAP1DQ6UB28 335 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms