RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 TACR3P29371 465 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 ALDH3B2P48448 385 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 IDH2P48735 452 aaKnown RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 CRISP1P54107 249 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 TAS2R41P59536 307 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 CXCR4P61073 352 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 SNRPGP62308 76 aaKnown RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 C17orf67Q0P5P2 114 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 COX10Q12887 443 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 PTGES3Q15185 160 aaKnown RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 TSTQ16762 297 aaKnown RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 PCGF3Q3KNV8 242 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 C3orf36Q3SXR2 165 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 TMEM176BQ3YBM2 270 aaPredicted RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 SYT14P1Q58G82 188 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 FGD3Q5JSP0 725 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 LINC01590Q5TEZ4 76 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 AADACL4Q5VUY2 407 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 LGALS9CQ6DKI2 356 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 XAF1Q6GPH4 301 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 PDZD9Q8IXQ8 264 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 LINC00471Q8N535 108 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 C11orf42Q8N5U0 333 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 TMCO5AQ8N6Q1 288 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 ATP6V1C2Q8NEY4 427 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 B4GALNT2Q8NHY0 566 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 RPS4Y2Q8TD47 263 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 MAGEE2Q8TD90 523 aaPredicted RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 BPIFA2Q96DR5 249 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 ELMOD3Q96FG2 381 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 SH3YL1Q96HL8 342 aaPredicted RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 NR1H4Q96RI1 486 aaPredicted RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 NUDT16L1Q9BRJ7 211 aaKnown RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 JAM3Q9BX67 310 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 HCAR1Q9BXC0 346 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 OR11A1Q9GZK7 315 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 OR52D1Q9H346 318 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 RANBP3Q9H6Z4 567 aaPredicted RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 EGLN3Q9H6Z9 239 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 SAP30LQ9HAJ7 183 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 CRLF2Q9HC73 371 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 HHATLQ9HCP6 504 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 OBP2BQ9NPH6 170 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 NRIP3Q9NQ35 241 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 HINT3Q9NQE9 182 aaKnown RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 PAPOLBQ9NRJ5 636 aaKnown RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 KRT84Q9NSB2 600 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 PLCXD1Q9NUJ7 323 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 MRPS18AQ9NVS2 196 aaKnown RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 MRPL39Q9NYK5 338 aaKnown RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 TAS2R5Q9NYW4 299 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 TAAR3PQ9P1P4 343 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 KIF17Q9P2E2 1029 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 AASSQ9UDR5 926 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 MRTO4Q9UKD2 239 aaKnown RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 TMEM5Q9Y2B1 443 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 LSM2Q9Y333 95 aaKnown RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 TSSC4Q9Y5U2 329 aaPredicted RBP3.98□□□□□ -1.77
ERCC1-216ENST00000592444 NPTNQ9Y639 398 aa3.98□□□□□ -1.77
ERCC1-216ENST00000592444 TRAV27A0A087WT01 109 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 A0A087WZY1 265 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 TMED7-TICAM2A0A0A6YYA0 188 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 ZNF716A6NP11 495 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 PRR32B1ATL7 298 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 MS4A18H0YCH9 400 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 SLC1A7O00341 560 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 DCTN6O00399 190 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 SURF4O15260 269 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 MRPL33O75394 65 aaKnown RBP3.97□□□□□ -1.77
ERCC1-216ENST00000592444 E2F6O75461 281 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 GMNNO75496 209 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 SLC2A10O95528 541 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 IGKV3-15P01624 115 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 FBP1P09467 338 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 PNMTP11086 282 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 PIPP12273 146 aaPredicted RBP3.97□□□□□ -1.77
ERCC1-216ENST00000592444 ZNF20P17024 532 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 MPGP29372 298 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 GRK5P34947 590 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 GIPRP48546 466 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 SLC9A3P48764 834 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 POLR2HP52434 150 aaKnown RBP3.97□□□□□ -1.77
ERCC1-216ENST00000592444 MAP2K6P52564 334 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 SLC16A1P53985 500 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 RAD23AP54725 363 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 SMIM11AP58511 58 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 GABARAPL2P60520 117 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 RAC3P60763 192 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 UBE2NP61088 152 aaKnown RBP3.97□□□□□ -1.77
ERCC1-216ENST00000592444 SLC3A1Q07837 685 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 MFGE8Q08431 387 aaPredicted RBP3.97□□□□□ -1.77
ERCC1-216ENST00000592444 SELENBP1Q13228 472 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 BLMHQ13867 455 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 CBFBQ13951 182 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 PDK3Q15120 406 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 LY6EQ16553 131 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 SMN1Q16637 294 aaKnown RBP3.97□□□□□ -1.77
ERCC1-216ENST00000592444 HIST3H3Q16695 136 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 MS4A18Q3C1V0 323 aa3.97□□□□□ -1.77
ERCC1-216ENST00000592444 MESTQ5EB52 335 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms