RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 NAA40Q86UY6 237 aa9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 LRRC28Q86X40 367 aaPredicted RBP9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 ZNF679Q8IYX0 411 aa9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 OR8B3Q8NGG8 313 aa9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 FAHD2AQ96GK7 314 aa9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 OR8B2Q96RD0 313 aa9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 MICU1Q9BPX6 476 aa9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 C9orf16Q9BUW7 83 aa9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 RTL8AQ9BWD3 113 aa9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 PATZ1Q9HBE1 687 aaKnown RBP9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 BRD7Q9NPI1 651 aa9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 CLN6Q9NWW5 311 aa9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 HAO2Q9NYQ3 351 aa9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 MIOXQ9UGB7 285 aa9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 PPIAL4AQ9Y536 164 aa9.88□□□□□ -0.83
PRKCSH-206ENST00000587509 ATRQ13535 2644 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 TMEM269A0A1B0GVZ9 245 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 hCG_1807616A0A1W2PRN6 198 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 CCDC182A6NF36 153 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 H0YL77 283 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 MTRF1O75570 445 aaKnown RBP9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 KRT8P05787 483 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 ATP6V1B1P15313 513 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 GSK3AP49840 483 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 ALDH3A2P51648 485 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 PRSS12P56730 875 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 FAM3AP98173 230 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 ROM1Q03395 351 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 EGR3Q06889 387 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 OR8B8Q15620 311 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 LIPNQ5VXI9 398 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 ZNF322Q6U7Q0 402 aaPredicted RBP9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 BTNL3Q6UXE8 466 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 ZNF771Q7L3S4 317 aaPredicted RBP9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 FAM220AQ7Z4H9 259 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 PRIMA1Q86XR5 153 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 SLC35F2Q8IXU6 374 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 RFLNBQ8N5W9 214 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 ZNF420Q8TAQ5 688 aaPredicted RBP9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 TRUB1Q8WWH5 349 aaKnown RBP9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 TMEM158Q8WZ71 300 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 MRPL48Q96GC5 212 aaKnown RBP9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 HIST1H2AAQ96QV6 131 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 OR8B4Q96RC9 309 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 SIGLEC11Q96RL6 698 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 IL4I1Q96RQ9 567 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 AMELYQ99218 206 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 MRI1Q9BV20 369 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 USE1Q9NZ43 259 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 RNF7Q9UBF6 113 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 GTF2A1LQ9UNN4 478 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 MPC1Q9Y5U8 109 aa9.87□□□□□ -0.83
PRKCSH-206ENST00000587509 YLPM1P49750 1951 aaKnown RBP9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 TRAV38-1A0A0B4J264 116 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 A0A0U1RQV5 110 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 TMEM210A6NLX4 147 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 CEACAM18A8MTB9 384 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 A8MXK9 166 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 EI24O14681 340 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 NDUFA2O43678 99 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 PLPP2O43688 288 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 MPZL2O60487 215 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 FAM20BO75063 409 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 PTBP3O95758 552 aaKnown RBP9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 CYB5R3P00387 301 aaPredicted RBP9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 ALPLP05186 524 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 HTR1FP30939 366 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 GNB2P62879 340 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 ACTC1P68032 377 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 ACTA1P68133 377 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 LCN2P80188 198 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 ZNF404Q494X3 552 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 BCL2L15Q5TBC7 163 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 AADACL4Q5VUY2 407 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 PRAMEF6Q5VXH4 476 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 MEDAGQ5VYS4 303 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 DCDC5Q6ZRR9 648 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 IL17RELQ6ZVW7 336 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 PRSS45Q7RTY3 260 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 THAP5Q7Z6K1 395 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 OR51G2Q8NGK0 314 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 NEIL1Q96FI4 390 aaPredicted RBP9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 PKP2Q99959 881 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 SSBP3Q9BWW4 388 aaPredicted RBP9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 UFSP2Q9NUQ7 469 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 NUFIP1Q9UHK0 495 aaKnown RBP9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 METRNQ9UJH8 293 aa9.86□□□□□ -0.83
PRKCSH-206ENST00000587509 IGHV3-64DA0A0J9YX35 117 aa9.85□□□□□ -0.83
PRKCSH-206ENST00000587509 ZNF816-ZNF321PA0A0X1KG74 233 aa9.85□□□□□ -0.83
PRKCSH-206ENST00000587509 F5H0A9 414 aaPredicted RBP9.85□□□□□ -0.83
PRKCSH-206ENST00000587509 LOC110117498-PIK3R3F6TDL0 507 aa9.85□□□□□ -0.83
PRKCSH-206ENST00000587509 TCF21O43680 179 aa9.85□□□□□ -0.83
PRKCSH-206ENST00000587509 OR2T7P0C7T2 308 aa9.85□□□□□ -0.83
PRKCSH-206ENST00000587509 MAP2K3P46734 347 aa9.85□□□□□ -0.83
PRKCSH-206ENST00000587509 PITPNBP48739 271 aa9.85□□□□□ -0.83
PRKCSH-206ENST00000587509 NPY4RP50391 375 aa9.85□□□□□ -0.83
PRKCSH-206ENST00000587509 CXCR4P61073 352 aa9.85□□□□□ -0.83
PRKCSH-206ENST00000587509 MAB21L1Q13394 359 aa9.85□□□□□ -0.83
PRKCSH-206ENST00000587509 ZSCAN26Q16670 478 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms