RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SNX29P2	Q8IUI4	249 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	KLHDC8A	Q8IYD2	350 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CMTM8	Q8IZV2	173 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	MS4A15	Q8N5U1	240 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	METTL13	Q8N6R0	699 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CDRT4	Q8N9R6	151 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	KIAA0895	Q8NCT3	520 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OR2Z1	Q8NG97	314 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OR5M9	Q8NGP3	310 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OR13J1	Q8NGT2	312 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OR2AJ1	Q8NGZ0	328 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OR2G2	Q8NGZ5	317 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	RPLP0P6	Q8NHW5	317 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ZNF431	Q8TF32	576 aa	Predicted RBP	4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SKA2	Q8WVK7	121 aa	Predicted RBP	4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	MRPS31	Q92665	395 aa	Known RBP	4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	NAT6	Q93015	286 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ISOC2	Q96AB3	205 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	PINX1	Q96BK5	328 aa	Known RBP	4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	C12orf42	Q96LP6	360 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	VSTM2L	Q96N03	204 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ZFP3	Q96NJ6	502 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ACCS	Q96QU6	501 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	FAM49A	Q9H0Q0	323 aa	Predicted RBP	4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	C20orf85	Q9H1P6	137 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ABCG5	Q9H222	651 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	TXNIP	Q9H3M7	391 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	UBE2Z	Q9H832	354 aa	Predicted RBP	4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	TUBA4B	Q9H853	241 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SRD5A3	Q9H8P0	318 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	PLEKHA1	Q9HB21	404 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	FARSA	Q9Y285	508 aa	Known RBP	4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	MEMO1	Q9Y316	297 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	YIPF1	Q9Y548	306 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	STYXL1	Q9Y6J8	313 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	KIF13A	Q9H1H9	1805 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ZNF142	P52746	1687 aa	Predicted RBP	4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	WDR81	Q562E7	1941 aa		4.58	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	BCL9L	Q86UU0	1499 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	PHIP	Q8WWQ0	1821 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	COLCA2	A8K830	154 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	GPR31	O00270	319 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	DVL1	O14640	695 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CCL25	O15444	150 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	XRCC3	O43542	346 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	PDE6D	O43924	150 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CTSV	O60911	334 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SH3BGRL	O75368	114 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SCEL	O95171	688 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	UTS2	O95399	124 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ETHE1	O95571	254 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CST1	P01037	141 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	MT-ND4L	P03901	98 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	MT-ND4	P03905	459 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	IGKV5-2	P06315	115 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	NMB	P08949	121 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CST2	P09228	141 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OR56A5	P0C7T3	313 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ZSCAN5DP	P0CG00	497 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	PPIAL4G	P0DN37	164 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OMG	P23515	440 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CRHBP	P24387	322 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	MYL9	P24844	172 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	BRS3	P32247	399 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	AVPR1A	P37288	418 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CRISP1	P54107	249 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CDH12	P55289	794 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OR2B8P	P59922	312 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SNRPD2	P62316	118 aa	Known RBP	4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	EIF5A	P63241	154 aa	Known RBP	4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	CDK3	Q00526	305 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ZP4	Q12836	540 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	HSPB3	Q12988	150 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ELAVL3	Q14576	367 aa	Known RBP	4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	RAB35	Q15286	201 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ADPRM	Q3LIE5	342 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	MEST	Q5EB52	335 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SAMD4B	Q5PRF9	694 aa	Known RBP	4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ZNF613	Q6PF04	617 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	LCLAT1	Q6UWP7	414 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	TMPPE	Q6ZT21	453 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	STRADA	Q7RTN6	431 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SSX6	Q7RTT6	188 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OLIG3	Q7RTU3	272 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	NUFIP2	Q7Z417	695 aa	Known RBP	4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ERAS	Q7Z444	233 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	DEFB128	Q7Z7B8	93 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	C11orf42	Q8N5U0	333 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ZNF738	Q8NE65	137 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	SLC26A10	Q8NG04	563 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	OR4D9	Q8NGE8	314 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	HMGCLL1	Q8TB92	370 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	LGALS14	Q8TCE9	139 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	ST8SIA1	Q92185	356 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	RAD54L	Q92698	747 aa		4.57	□□□□□ -1.68
RALGAPA1-215	ENST00000556839	TMEM159	Q96B96	161 aa		4.57	□□□□□ -1.68

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