RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 LIME1Q9H400 295 aa3.4□□□□□ -1.87
TRAV15-201ENST00000556680 LIN28AQ9H9Z2 209 aaKnown RBP3.4□□□□□ -1.87
TRAV15-201ENST00000556680 NGBQ9NPG2 151 aa3.4□□□□□ -1.87
TRAV15-201ENST00000556680 C8orf4Q9NR00 106 aa3.4□□□□□ -1.87
TRAV15-201ENST00000556680 FBXO8Q9NRD0 319 aa3.4□□□□□ -1.87
TRAV15-201ENST00000556680 TAS2R16Q9NYV7 291 aa3.4□□□□□ -1.87
TRAV15-201ENST00000556680 SEC14L4Q9UDX3 406 aa3.4□□□□□ -1.87
TRAV15-201ENST00000556680 ZNF639Q9UID6 485 aa3.4□□□□□ -1.87
TRAV15-201ENST00000556680 NXT1Q9UKK6 140 aaKnown RBP3.4□□□□□ -1.87
TRAV15-201ENST00000556680 POFUT2Q9Y2G5 429 aa3.4□□□□□ -1.87
TRAV15-201ENST00000556680 NTNG1Q9Y2I2 539 aa3.4□□□□□ -1.87
TRAV15-201ENST00000556680 ZNF175Q9Y473 711 aa3.4□□□□□ -1.87
TRAV15-201ENST00000556680 GMPPBQ9Y5P6 360 aa3.4□□□□□ -1.87
TRAV15-201ENST00000556680 GMEB1Q9Y692 573 aa3.4□□□□□ -1.87
TRAV15-201ENST00000556680 MED13Q9UHV7 2174 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 NSG1A0A0A6YYJ2 146 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 FRG2CA6NGY1 282 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 CLDN24A6NM45 220 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 RNF212BA8MTL3 300 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 H3BNH8 94 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 WWP2O00308 870 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 FAAHO00519 579 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 KPNA4O00629 521 aaPredicted RBP3.39□□□□□ -1.87
TRAV15-201ENST00000556680 BCKDKO14874 412 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 UGT2B11O75310 529 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 TNFSF15O95150 251 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 UTS2O95399 124 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 OXSR1O95747 527 aaPredicted RBP3.39□□□□□ -1.87
TRAV15-201ENST00000556680 CLIC3O95833 236 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 LGI1O95970 557 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 CSTAP01040 98 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 IGKV1D-16P01601 117 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 IFI6P09912 130 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 GKN3PP0CG01 181 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 ANXA8P13928 327 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 MAGEA2P43356 314 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 SLC6A8P48029 635 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 DAPP51397 102 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 NOVA1P51513 510 aaKnown RBP3.39□□□□□ -1.87
TRAV15-201ENST00000556680 RAG2P55895 527 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 COPZ1P61923 177 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 RPS15P62841 145 aaKnown RBP3.39□□□□□ -1.87
TRAV15-201ENST00000556680 ZFP36L1Q07352 338 aaKnown RBP3.39□□□□□ -1.87
TRAV15-201ENST00000556680 FUT7Q11130 342 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 ILKQ13418 452 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 RAPSNQ13702 412 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 EBPQ15125 230 aaKnown RBP3.39□□□□□ -1.87
TRAV15-201ENST00000556680 MAPK14Q16539 360 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 MICAQ29983 383 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 ISXQ2M1V0 245 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 NDUFAF6Q330K2 333 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 RFX4Q33E94 735 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 TTC23Q5W5X9 447 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 DHRS4L2Q6PKH6 230 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 HSDL2Q6YN16 418 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 DPY19L2P2Q6ZN68 376 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 ZNF550Q7Z398 422 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 NUFIP2Q7Z417 695 aaKnown RBP3.39□□□□□ -1.87
TRAV15-201ENST00000556680 C9orf40Q8IXQ3 194 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 C8orf59Q8N0T1 100 aaPredicted RBP3.39□□□□□ -1.87
TRAV15-201ENST00000556680 ZNF615Q8N8J6 731 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 PLPP5Q8NEB5 264 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 B3GNT7Q8NFL0 401 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 OR4D11Q8NGI4 311 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 OR5L2Q8NGL0 311 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 OR6T1Q8NGN1 323 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 WDR36Q8NI36 951 aaKnown RBP3.39□□□□□ -1.87
TRAV15-201ENST00000556680 PIGXQ8TBF5 258 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 SLC22A8Q8TCC7 542 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 ZNF721Q8TF20 911 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 SLC38A4Q969I6 547 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 C14orf79Q96F83 325 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 SLC41A3Q96GZ6 507 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 C7orf34Q96L11 122 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 PRRC1Q96M27 445 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 VSTM2LQ96N03 204 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 MBOAT4Q96T53 435 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 ARHGDIGQ99819 225 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 OSBPL10Q9BXB5 764 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 DEFB126Q9BYW3 111 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 NMNAT2Q9BZQ4 307 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 GABARAPL1Q9H0R8 117 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 ADNPQ9H2P0 1102 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 HEXA-AS1Q9H8Q6 139 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 JPT2Q9H910 190 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 NMNAT1Q9HAN9 279 aaPredicted RBP3.39□□□□□ -1.87
TRAV15-201ENST00000556680 NTN4Q9HB63 628 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 TMEM27Q9HBJ8 222 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 BCL2L10Q9HD36 194 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 POLE3Q9NRF9 147 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 IMPAD1Q9NX62 359 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 KLRF1Q9NZS2 232 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 IL20RAQ9UHF4 553 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.39□□□□□ -1.87
TRAV15-201ENST00000556680 LRRC42Q9Y546 428 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 FKBP7Q9Y680 259 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 DSPPQ9NZW4 1301 aa3.39□□□□□ -1.87
TRAV15-201ENST00000556680 IGLV3-12A0A075B6K2 115 aa3.38□□□□□ -1.87
TRAV15-201ENST00000556680 IGKV3D-11A0A0A0MRZ8 115 aa3.38□□□□□ -1.87
TRAV15-201ENST00000556680 TEX48A0A1B0GUV7 120 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms