RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 RNPS1Q15287 305 aaKnown RBP8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 NNATQ16517 81 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 SIRT6Q8N6T7 355 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 PRRT1Q99946 306 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 FAM173AQ9BQD7 235 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 SLC32A1Q9H598 525 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 PBRM1Q86U86 1689 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 FAM221AA4D161 298 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 OTOL1A6NHN0 477 aaPredicted RBP8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 C1QL1O75973 258 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 ADH4P08319 380 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 TACSTD2P09758 323 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 VSIG10L2P0DP72 767 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 SLC14A1Q13336 389 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 ZNF77Q15935 545 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 ZC3H3Q8IXZ2 948 aaKnown RBP8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 OR4B1Q8NGF8 309 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 OR5AK2Q8NH90 309 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 PCGF1Q9BSM1 259 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 TMPRSS13Q9BYE2 586 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 C1orf123Q9NWV4 160 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 WIPI2Q9Y4P8 454 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 A4D1N5 150 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 CDC14BO60729 498 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 C2orf68Q2NKX9 166 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 OR4D9Q8NGE8 314 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 NUS1Q96E22 293 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 KTI12Q96EK9 354 aaPredicted RBP8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 SLC17A9Q9BYT1 436 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 CHRNA10Q9GZZ6 450 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 A6NJY4 79 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 XRCC2O43543 280 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 NUDT21O43809 227 aaKnown RBP8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 TMPRSS3P57727 454 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 MSMO1Q15800 293 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 OPN5Q6U736 354 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 D2HGDHQ8N465 521 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 LENG9Q96B70 501 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 ELOVL5Q9NYP7 299 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 B4GALT7Q9UBV7 327 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 UFC1Q9Y3C8 167 aa8.13□□□□□ -1.11
GTF2A1-203ENST00000553612 RBFOX3A6NFN3 312 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 CLDN11O75508 207 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 ZNF83P51522 516 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 STC1P52823 247 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 BACE1P56817 501 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 LRP10Q7Z4F1 713 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 OR2C3Q8N628 320 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 TOP6BLQ8N6T0 577 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 LINC00116Q8NCU8 138 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 OR52E4Q8NGH9 312 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 OR5H2Q8NGV7 314 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 GABARAPL3Q9BY60 117 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 ARPC3O15145 178 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 HCRTR1O43613 425 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 SNAI2O43623 268 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 GPR32O75388 356 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 TDGF1P13385 188 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 SLC6A9P48067 706 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 WNT3P56703 355 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 EFNB1P98172 346 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 PLPP4Q5VZY2 271 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 SARGQ9BW04 601 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 AURKAIP1Q9NWT8 199 aaPredicted RBP8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 SLC45A2Q9UMX9 530 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 COL1A2P08123 1366 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 TBL1XO60907 577 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 PNPLA4P41247 253 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 IER3P46695 156 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 SYT14P1Q58G82 188 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 C1orf194Q5T5A4 169 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 OGFOD3Q6PK18 319 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 CLEC14AQ86T13 490 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 TEAD3Q99594 435 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 GP6Q9HCN6 339 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 PLEK2Q9NYT0 353 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 COX11Q9Y6N1 276 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 MYBPHLA2RUH7 354 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 EIF4E2O60573 245 aaKnown RBP8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 IGHV2-5P01817 119 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 CRISP2P16562 243 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 GFRA1P56159 465 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 DCAF7P61962 342 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 GRB2P62993 217 aaKnown RBP8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 ARG2P78540 354 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 OR11G2Q8NGC1 345 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 MOB3AQ96BX8 217 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 C12orf42Q96LP6 360 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 SLC6A13Q9NSD5 602 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 CACNA1CQ13936 2221 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 ASPDHA6ND91 283 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 MPZL1O95297 269 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 NUDT3O95989 172 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 FAM69BQ5VUD6 431 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 CYB561D1Q8N8Q1 229 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 OR10G6Q8NH81 332 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 KCNG3Q8TAE7 436 aa8.12□□□□□ -1.11
GTF2A1-203ENST00000553612 RBMXL1Q96E39 390 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms