RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 KATNAL2Q8IYT4 538 aa4.86□□□□□ -1.63
TGFBR1-208ENST00000550253 PANX2Q96RD6 677 aa4.86□□□□□ -1.63
TGFBR1-208ENST00000550253 SLC29A1Q99808 456 aa4.86□□□□□ -1.63
TGFBR1-208ENST00000550253 ZNF696Q9H7X3 374 aa4.86□□□□□ -1.63
TGFBR1-208ENST00000550253 TRIM45Q9H8W5 580 aaPredicted RBP4.86□□□□□ -1.63
TGFBR1-208ENST00000550253 PAK1IP1Q9NWT1 392 aaPredicted RBP4.86□□□□□ -1.63
TGFBR1-208ENST00000550253 DHCR7Q9UBM7 475 aaKnown RBP4.86□□□□□ -1.63
TGFBR1-208ENST00000550253 SLC2A6Q9UGQ3 507 aa4.86□□□□□ -1.63
TGFBR1-208ENST00000550253 SAMD4AQ9UPU9 718 aaKnown RBP4.86□□□□□ -1.63
TGFBR1-208ENST00000550253 ERGIC3Q9Y282 383 aa4.86□□□□□ -1.63
TGFBR1-208ENST00000550253 STK38LQ9Y2H1 464 aa4.86□□□□□ -1.63
TGFBR1-208ENST00000550253 NCOA6Q14686 2063 aaPredicted RBP4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 ANKRD12Q6UB98 2062 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 HRNRQ86YZ3 2850 aaPredicted RBP4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 IGHV3-16A0A0C4DH30 117 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 ACOX3O15254 700 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 AKR7A2O43488 359 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 PRKYO43930 277 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 IFNA16P05015 189 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 CT62P0C5K7 136 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 HMGCLP35914 325 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 XCR1P46094 333 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 PRKXP51817 358 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 NUP107P57740 925 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 RGS8P57771 180 aaPredicted RBP4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 DOC2AQ14183 400 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 PIGHQ14442 188 aaPredicted RBP4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 TRIM16LQ309B1 348 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 GPRC6AQ5T6X5 926 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 MLIPQ5VWP3 458 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 REG3GQ6UW15 175 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 HDDC2Q7Z4H3 204 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 NT5DC3Q86UY8 548 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 RAB43Q86YS6 212 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 TCAIMQ8N3R3 496 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 RIBC1Q8N443 379 aaPredicted RBP4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 ZADH2Q8N4Q0 377 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 OR7G2Q8NG99 324 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 OR2Y1Q8NGV0 311 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 GRPEL2Q8TAA5 225 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 SLC38A4Q969I6 547 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 BORCS5Q969J3 196 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 CHMP6Q96FZ7 201 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 KCNA7Q96RP8 456 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 NIPAL2Q9H841 368 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 NUDT15Q9NV35 164 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 IL17CQ9P0M4 197 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 GNPTGQ9UJJ9 305 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 PACSIN2Q9UNF0 486 aaPredicted RBP4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 STARD10Q9Y365 291 aa4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 MAP1AP78559 2803 aaPredicted RBP4.85□□□□□ -1.63
TGFBR1-208ENST00000550253 CUBNO60494 3623 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 A0A087X0T9 212 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 LOC285095A0A1B0GVY8 99 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 MGAT4DA6NG13 374 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 EVPLLA8MZ36 301 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 E7EQ34 232 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 ATP6V1G2-DDX39BF2Z307 99 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 NDUFS8O00217 210 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 DLGAP1O14490 977 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 CLOCKO15516 846 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 OR10H3O60404 316 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 NOS1APO75052 506 aaPredicted RBP4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 LYPD3O95274 346 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 TMEM50AO95807 157 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 TFPTP0C1Z6 253 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 PTBP1P26599 531 aaKnown RBP eCLIP4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 PEBP1P30086 187 aaKnown RBP4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 FGF9P31371 208 aaPredicted RBP4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 OTX1P32242 354 aaPredicted RBP4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 CDKN1BP46527 198 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 RAB9AP51151 201 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 DAP3P51398 398 aaKnown RBP4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 CLDN8P56748 225 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 KCNJ11Q14654 390 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 KRTAP21-3Q3LHN1 58 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 TMEM30BQ3MIR4 351 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 ERICH5Q6P6B1 374 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 SHISA6Q6ZSJ9 500 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 COX15Q7KZN9 410 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 EIF3MQ7L2H7 374 aaKnown RBP4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 ERI1Q8IV48 349 aaKnown RBP4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 MREGQ8N565 214 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 TBC1D19Q8N5T2 526 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 CSNK1A1LQ8N752 337 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 OR2L2Q8NH16 312 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 MYDGFQ969H8 173 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 CLCC1Q96S66 551 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 MBOAT4Q96T53 435 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 CNN2Q99439 309 aaKnown RBP4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 OR52A5Q9H2C5 316 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 NHEJ1Q9H9Q4 299 aaPredicted RBP4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 MRPL47Q9HD33 250 aaKnown RBP4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 LZTFL1Q9NQ48 299 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 PNO1Q9NRX1 252 aaKnown RBP4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 TXLNGQ9NUQ3 528 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 B3GNT2Q9NY97 397 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 PDP1Q9P0J1 537 aaPredicted RBP4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 PHF11Q9UIL8 331 aa4.84□□□□□ -1.63
TGFBR1-208ENST00000550253 RIMS3Q9UJD0 308 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms