RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 SLC22A4Q9H015 551 aa9.32□□□□□ -0.92
DDB1-222ENST00000543627 OPA3Q9H6K4 179 aa9.32□□□□□ -0.92
DDB1-222ENST00000543627 PPP1R3EQ9H7J1 279 aa9.32□□□□□ -0.92
DDB1-222ENST00000543627 NIPAL2Q9H841 368 aa9.32□□□□□ -0.92
DDB1-222ENST00000543627 HIF1ANQ9NWT6 349 aa9.32□□□□□ -0.92
DDB1-222ENST00000543627 C1orf123Q9NWV4 160 aa9.32□□□□□ -0.92
DDB1-222ENST00000543627 CLN6Q9NWW5 311 aa9.32□□□□□ -0.92
DDB1-222ENST00000543627 NOP16Q9Y3C1 178 aaKnown RBP9.32□□□□□ -0.92
DDB1-222ENST00000543627 YLPM1P49750 1951 aaKnown RBP9.32□□□□□ -0.92
DDB1-222ENST00000543627 PRR32B1ATL7 298 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 LOC110117498-PIK3R3F6TDL0 507 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 TMEM178BH3BS89 294 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 PHYHO14832 338 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 GMDSO60547 372 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 KRT8P05787 483 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 MSMBP08118 114 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 HNF1AP20823 631 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 DDOSTP39656 456 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 PMELP40967 661 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 PSMA6P60900 246 aaKnown RBP9.31□□□□□ -0.92
DDB1-222ENST00000543627 HOXA4Q00056 320 aaPredicted RBP9.31□□□□□ -0.92
DDB1-222ENST00000543627 POU4F2Q12837 409 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 RCN1Q15293 331 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 ZMYND11Q15326 602 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 ZNF829Q3KNS6 432 aaPredicted RBP9.31□□□□□ -0.92
DDB1-222ENST00000543627 DMRTC1Q5HYR2 192 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 SFRP4Q6FHJ7 346 aaPredicted RBP9.31□□□□□ -0.92
DDB1-222ENST00000543627 ZNF826PQ6ZT77 177 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 RHOUQ7L0Q8 258 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 SSX6Q7RTT6 188 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 PRSS45Q7RTY3 260 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 THAP5Q7Z6K1 395 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 C1orf87Q8N0U7 546 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 OR51F2Q8NH61 342 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 OR51E1Q8TCB6 317 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 TRUB1Q8WWH5 349 aaKnown RBP9.31□□□□□ -0.92
DDB1-222ENST00000543627 RNFT2Q96EX2 444 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 HRASLS5Q96KN8 279 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 LYZL4Q96KX0 146 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 HIST1H2AAQ96QV6 131 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 FN3KRPQ9HA64 309 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 C14orf119Q9NWQ9 140 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 MRPL15Q9P015 296 aaKnown RBP9.31□□□□□ -0.92
DDB1-222ENST00000543627 CDC42EP3Q9UKI2 254 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 RHBDD3Q9Y3P4 386 aa9.31□□□□□ -0.92
DDB1-222ENST00000543627 PPIAL4EA0A075B759 164 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 LOC100130705A0A1B0GUX0 176 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 hCG_38984A0A1B0GV85 526 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 A0A1W2PQL4 384 aaPredicted RBP9.3□□□□□ -0.92
DDB1-222ENST00000543627 A6NIN4 97 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 ANXA2P2A6NMY6 339 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 PPIAL4DF5H284 164 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 C3orf80F5H4A9 247 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 PLPP2O43688 288 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 FAM20BO75063 409 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 ZNF254O75437 659 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 IGHV2-70P01814 119 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 IGHV2-5P01817 119 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 OR2T7P0C7T2 308 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 PPIAL4FP0DN26 164 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 CD80P33681 288 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 CD200P41217 278 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 IL5RAQ01344 420 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 MFGE8Q08431 387 aaPredicted RBP9.3□□□□□ -0.92
DDB1-222ENST00000543627 MZT1Q08AG7 82 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 OR8B8Q15620 311 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 TP53I3Q53FA7 332 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 BCL2L15Q5TBC7 163 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 DEGS2Q6QHC5 323 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 MOB3CQ70IA8 216 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 LRRC28Q86X40 367 aaPredicted RBP9.3□□□□□ -0.92
DDB1-222ENST00000543627 SPICQ8N5J4 248 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 SPERTQ8NA61 448 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 CSNK2A3Q8NEV1 391 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 OR2T27Q8NH04 317 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 CYGBQ8WWM9 190 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 SPSB4Q96A44 273 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 TMEM186Q96B77 213 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 RNF170Q96K19 258 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 SIGLEC11Q96RL6 698 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 MNTQ99583 582 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 MICU1Q9BPX6 476 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 RGCCQ9H4X1 137 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 METTL17Q9H7H0 456 aaPredicted RBP9.3□□□□□ -0.92
DDB1-222ENST00000543627 AMBNQ9NP70 447 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 GPR84Q9NQS5 396 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 FAM206AQ9NX38 181 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 GNG8Q9UK08 70 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.3□□□□□ -0.92
DDB1-222ENST00000543627 PPIAL4AQ9Y536 164 aa9.3□□□□□ -0.92
DDB1-222ENST00000543627 NF1P21359 2839 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 FN1P02751 2386 aaKnown RBP9.29□□□□□ -0.92
DDB1-222ENST00000543627 DAPL1A0PJW8 107 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 SNTNA6NMZ2 147 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 IFNL4K9M1U5 179 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 P2RY10O00398 339 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 PNPP00491 289 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 RPS2P15880 293 aaKnown RBP9.29□□□□□ -0.92
DDB1-222ENST00000543627 SRD5A1P18405 259 aa9.29□□□□□ -0.92
DDB1-222ENST00000543627 PSMB10P40306 273 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms