RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 STOML3Q8TAV4 291 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 IFI44Q8TCB0 444 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 SLC25A43Q8WUT9 341 aaPredicted RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 ZNRF4Q8WWF5 429 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 ZBTB8AQ96BR9 441 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 MUCL1Q96DR8 90 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 Q96M85 177 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 NMNAT3Q96T66 252 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 TCEAL2Q9H3H9 227 aaPredicted RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 C12orf49Q9H741 205 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 MYOZ1Q9NP98 299 aaPredicted RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 ZNF71Q9NQZ8 489 aaPredicted RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 MMP26Q9NRE1 261 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 RXFP3Q9NSD7 469 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 ARHGEF17Q96PE2 2063 aaPredicted RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 NUP210LQ5VU65 1888 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 ZNF462Q96JM2 2506 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 TRAV8-7A0A075B6U6 113 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 H7C1C5 153 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 M0QYG6 137 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 GLCEO94923 617 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 CPMP14384 443 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 CD1CP29017 333 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 GCH1P30793 250 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 GNRHRP30968 328 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 GNG10P50151 68 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 HERV-K104P61576 105 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 LCN6P62502 163 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 RNF4P78317 190 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 INSM1Q01101 510 aaPredicted RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 ATPAF1Q5TC12 328 aaPredicted RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 METRNLQ641Q3 311 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 IL34Q6ZMJ4 242 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 VASH2Q86V25 355 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 STX12Q86Y82 276 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 ZNF808Q8N4W9 903 aaPredicted RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 TMEM229BQ8NBD8 167 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 GPX8Q8TED1 209 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 RNF141Q8WVD5 230 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 TCTN2Q96GX1 697 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 ZC3H10Q96K80 434 aaKnown RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 LURAP1Q96LR2 239 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 TCEAL7Q9BRU2 100 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 PRDM13Q9H4Q3 707 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 UQCC1Q9NVA1 299 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 OBP2AQ9NY56 170 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 KCNE5Q9UJ90 142 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 ADAM18Q9Y3Q7 739 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 TRGV8A0A0C4DH27 118 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 BTBD17A6NE02 478 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 A6NNC1 897 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 PRR32B1ATL7 298 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 UBE2CO00762 179 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 PPIHO43447 177 aaKnown RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 MRPL33O75394 65 aaKnown RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 MED6O75586 246 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 NGFRP08138 427 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 FOLR2P14207 255 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 ZNF14P17017 642 aaPredicted RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 MPLP40238 635 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 GLP1RP43220 463 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 AIMP2Q13155 320 aaKnown RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 FHL1Q13642 323 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 SSPNQ14714 243 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 MEF2DQ14814 521 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 RAB11BQ15907 218 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 HLA-BQ31612 363 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 MRPL21Q7Z2W9 205 aaKnown RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 MISPQ8IVT2 679 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 GALNT16Q8N428 558 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 NPEPL1Q8NDH3 523 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 ZPLD1Q8TCW7 415 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 FAM46BQ96A09 425 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 TMEM106AQ96A25 262 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 HDAC8Q9BY41 377 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 ULBP2Q9BZM5 246 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 SLC5A7Q9GZV3 580 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 ATG5Q9H1Y0 275 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 FBXO34Q9NWN3 711 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 FLRT3Q9NZU0 649 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 ZFHX4Q86UP3 3567 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 TRBV5-7A0A0A0MS05 114 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 TMEM72A0PK05 275 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 ATXN7O15265 892 aaPredicted RBP4.68□□□□□ -1.66
PROM1-220ENST00000540805 AK1P00568 194 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 GABRG2P18507 467 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 CPT2P23786 658 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 LTBRP36941 435 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 SLC26A5P58743 744 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 S100A10P60903 97 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 VAMP2P63027 116 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 CXADRP78310 365 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 PJVKQ0ZLH3 352 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 DPY19L2P2Q6ZN68 376 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 YRDCQ86U90 279 aaKnown RBP4.68□□□□□ -1.66
PROM1-220ENST00000540805 BPIFB2Q8N4F0 458 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 FAM24BQ8N5W8 94 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 OR5AP2Q8NGF4 316 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 RASD2Q96D21 266 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 PIK3IP1Q96FE7 263 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms