RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 PMCHP20382 165 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 PLP1P60201 277 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 AQP6Q13520 282 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 MLF2Q15773 248 aaPredicted RBP9.02□□□□□ -0.97
COL4A6-208ENST00000538570 DRAM2Q6UX65 266 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 SYS1Q8N2H4 156 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 ARIH2OSQ8N7S6 290 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 ASB13Q8WXK3 278 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 MRPS24Q96EL2 167 aaKnown RBP9.02□□□□□ -0.97
COL4A6-208ENST00000538570 PDXPQ96GD0 296 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 PACRGQ96M98 296 aaPredicted RBP9.02□□□□□ -0.97
COL4A6-208ENST00000538570 GPR84Q9NQS5 396 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 PPM1DO15297 605 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 RRP8O43159 456 aaKnown RBP9.02□□□□□ -0.97
COL4A6-208ENST00000538570 XRCC2O43543 280 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 RRASP10301 218 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 HRH1P35367 487 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 TAS2R60P59551 318 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 NHLH2Q02577 135 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 WDR73Q6P4I2 378 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 WFIKKN1Q96NZ8 548 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 CACFD1Q9UGQ2 172 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 R4GMQ9 66 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 AQP8O94778 261 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 PAQR6Q6TCH4 344 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 TMEM207Q6UWW9 146 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 C6orf15Q6UXA7 325 aaPredicted RBP9.02□□□□□ -0.97
COL4A6-208ENST00000538570 LYG2Q86SG7 212 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 FAM216AQ8WUB2 273 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 NPAS1Q99742 590 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 RAB18Q9NP72 206 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 FBXO34Q9NWN3 711 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 ATP23Q9Y6H3 246 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 PMS2P1A4D2B8 440 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 C5orf49A4QMS7 147 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 CD27P26842 260 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 RPS16P62249 146 aaKnown RBP9.02□□□□□ -0.97
COL4A6-208ENST00000538570 GPR61Q9BZJ8 451 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 COMMD5Q9GZQ3 224 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 ZBTB42B2RXF5 422 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 NRG2O14511 850 aaPredicted RBP9.01□□□□□ -0.97
COL4A6-208ENST00000538570 TNFRSF10CO14798 259 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 GPR37O15354 613 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 CD22P20273 847 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 FAAP20Q6NZ36 180 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 LSRQ86X29 649 aaPredicted RBP9.01□□□□□ -0.97
COL4A6-208ENST00000538570 RDH5Q92781 318 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 SMIM19Q96E16 107 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 TOX2Q96NM4 488 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 IKZF5Q9H5V7 419 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 TIMM9Q9Y5J7 89 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 C4BP0C0L5 1744 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 CROCCQ5TZA2 2017 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 A0A1W2PR48 441 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 IFITM5A6NNB3 132 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 RPL7P18124 248 aaKnown RBP9.01□□□□□ -0.97
COL4A6-208ENST00000538570 ARRB2P32121 409 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 FOXO1Q12778 655 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 OR2AK2Q8NG84 335 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 IL22RA2Q969J5 263 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 LINC00052Q96N35 136 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 SLC25A19Q9HC21 320 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 IL19Q9UHD0 177 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 RGPD1P0DJD0 1748 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 COX7A2P2O60397 106 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 OR2J2O76002 312 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 RNF224P0DH78 156 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 EVX1P49640 407 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 NKAIN1Q4KMZ8 207 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 FAM26DQ5JW98 314 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 CAMKMTQ7Z624 323 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 SLC37A2Q8TED4 501 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 MS4A4AQ96JQ5 239 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 C1QTNF6Q9BXI9 259 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 KLKB1P03952 638 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 OPRM1P35372 400 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 FABP5Q01469 135 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 RPL18Q07020 188 aaKnown RBP9.01□□□□□ -0.97
COL4A6-208ENST00000538570 ZNF154Q13106 437 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 PLPP6Q8IY26 295 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 DTWD2Q8NBA8 298 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 ZNF738Q8NE65 137 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 PBOV1Q9GZY1 135 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 ZNF835Q9Y2P0 537 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 GPR31O00270 319 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 CRHP06850 196 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 SLC25A4P12235 298 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 PIGPP57054 158 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 ZNF385BQ569K4 471 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 STAC2Q6ZMT1 411 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 BTLAQ7Z6A9 289 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 OR13C5Q8NGS8 318 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 MARCH1Q8TCQ1 289 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 NUDCD2Q8WVJ2 157 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 SLCO4A1Q96BD0 722 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 OXGR1Q96P68 337 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 ZBP1Q9H171 429 aa9.01□□□□□ -0.97
COL4A6-208ENST00000538570 GSX1Q9H4S2 264 aaPredicted RBP9.01□□□□□ -0.97
COL4A6-208ENST00000538570 A0A1W2PNV4 684 aa9□□□□□ -0.97
COL4A6-208ENST00000538570 TMEM202A6NGA9 273 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms