RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ADAT1Q9BUB4 502 aaKnown RBP19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 GCM1Q9NP62 436 aa19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 G6PC2Q9NQR9 355 aa19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 PPP1R3CQ9UQK1 317 aa19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 WIPI2Q9Y4P8 454 aa19.19■□□□□ 0.66
SFSWAP-204ENST00000535399 IGHV3-64DA0A0J9YX35 117 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 ANKRD30BLA7E2S9 258 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 LOC110117498-PIK3R3F6TDL0 507 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 GMDSO60547 372 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 SULT1C4O75897 302 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 IGLV3-1P01715 115 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 ACKR3P25106 362 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 IL2RGP31785 369 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 ISL1P61371 349 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 MVKQ03426 396 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 LIPNQ5VXI9 398 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 YIPF7Q8N8F6 280 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 CLDND2Q8NHS1 167 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 NRG4Q8WWG1 115 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 DVL3Q92997 716 aaPredicted RBP19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 ADI1Q9BV57 179 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 MOB1AQ9H8S9 216 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 AMBNQ9NP70 447 aa19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 MRPS18AQ9NVS2 196 aaKnown RBP19.18■□□□□ 0.66
SFSWAP-204ENST00000535399 TTRP02766 147 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 CAPGP40121 348 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 PMELP40967 661 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 GATA4P43694 442 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 ACTC1P68032 377 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 ACTA1P68133 377 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 SMN1Q16637 294 aaKnown RBP19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 MOGAT3Q86VF5 341 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 KLBQ86Z14 1044 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 CSNK2A3Q8NEV1 391 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 OR51E1Q8TCB6 317 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 HPS1Q92902 700 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 TIMD4Q96H15 378 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 NARFLQ9H6Q4 476 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 OR52A1Q9UKL2 312 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 RHBDD3Q9Y3P4 386 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 PCDHGB1Q9Y5G3 927 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 HIVEP2P31629 2446 aa19.17■□□□□ 0.66
SFSWAP-204ENST00000535399 RPP14O95059 124 aaKnown RBP19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 PTBP3O95758 552 aaKnown RBP19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 GZMKP49863 264 aa19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 ELMOD2Q8IZ81 293 aa19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 ACBD7Q8N6N7 88 aa19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 ZNF420Q8TAQ5 688 aaPredicted RBP19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 CNIH3Q8TBE1 160 aa19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 RORBQ92753 470 aa19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 RAB1CQ92928 201 aa19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 RNF166Q96A37 237 aaPredicted RBP19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 VCXQ9H320 206 aa19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 PPP1R3EQ9H7J1 279 aa19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 GPR84Q9NQS5 396 aa19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 GTF2A1LQ9UNN4 478 aa19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 RPL36Q9Y3U8 105 aaKnown RBP19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 SNX5Q9Y5X3 404 aa19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 NPTNQ9Y639 398 aa19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 NSD1Q96L73 2696 aaPredicted RBP19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 ANK3Q12955 4377 aaKnown RBP19.16■□□□□ 0.66
SFSWAP-204ENST00000535399 LOC100289279A0A1B0GTE1 492 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 DAPL1A0PJW8 107 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 H0YAE9 185 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 TMEM178BH3BS89 294 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 IFNL4K9M1U5 179 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 LMO4P61968 165 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 IL18R1Q13478 541 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 CDONQ4KMG0 1287 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 TP53I3Q53FA7 332 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 BCL2L15Q5TBC7 163 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 PRAMEF6Q5VXH4 476 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 CYB5R2Q6BCY4 276 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 KRT74Q7RTS7 529 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 SPERTQ8NA61 448 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 SETD9Q8NE22 299 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 MSI2Q96DH6 328 aaKnown RBP19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 C1orf159Q96HA4 380 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 ACOXLQ9NUZ1 547 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 GNG8Q9UK08 70 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 SLC22A13Q9Y226 551 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 MYRFQ9Y2G1 1151 aa19.15■□□□□ 0.66
SFSWAP-204ENST00000535399 FN1P02751 2386 aaKnown RBP19.14■□□□□ 0.66
SFSWAP-204ENST00000535399 CST4P01036 141 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 IGHV2-70P01814 119 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 IGHA1P01876 353 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 GNAO1P09471 354 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 ATP6V1B1P15313 513 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 RAB40BQ12829 278 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 MPPED2Q15777 294 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 SNCBQ16143 134 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 ZNF181Q2M3W8 571 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 C6orf52Q5T4I8 152 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 CATSPERDQ86XM0 798 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 OR52I1Q8NGK6 324 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 Q8TCH9 128 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 ITFG2Q969R8 447 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 ERGIC1Q969X5 290 aa19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 FAM71F1Q96KD3 344 aaPredicted RBP19.14■□□□□ 0.65
SFSWAP-204ENST00000535399 ZNF649Q9BS31 505 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms