RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 CAPN7Q9Y6W3 813 aa16.55■□□□□ 0.24
SQSTM1-215ENST00000514093 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 TXNDC12O95881 172 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 HLA-DQA2P01906 255 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 IGLL1P15814 213 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 MUC1P15941 1255 aaPredicted RBP16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 RPS6KA3P51812 740 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 CSNK2BP67870 215 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 DEFB121Q5J5C9 76 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 CRIP3Q6Q6R5 217 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 DPY19L2P2Q6ZN68 376 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 OR2T12Q8NG77 320 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 SLC7A13Q8TCU3 470 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 AJUBAQ96IF1 538 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 RSRC1Q96IZ7 334 aaKnown RBP16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 NMNAT3Q96T66 252 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 TMEM120AQ9BXJ8 343 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 FAM234AQ9H0X4 552 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 C14orf119Q9NWQ9 140 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 TMEM5Q9Y2B1 443 aa16.54■□□□□ 0.24
SQSTM1-215ENST00000514093 FAM220BPB1ANY3 271 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 CHST1O43916 411 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 ZNF682O95780 498 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 RPS27P42677 84 aaKnown RBP16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 TGM4P49221 684 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 ACSM1Q08AH1 577 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 LRRC10Q5BKY1 277 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 DPY19L4Q7Z388 723 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 OR4F17Q8NGA8 305 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 OR8S1Q8NH09 359 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 SPTSSAQ969W0 71 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 DMRTB1Q96MA1 342 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 ERMAPQ96PL5 475 aaPredicted RBP16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 OR4F4Q96R69 305 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 CITED2Q99967 270 aaPredicted RBP16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 NSRP1Q9H0G5 558 aaKnown RBP16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 FN3KQ9H479 309 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 RANBP3Q9H6Z4 567 aaPredicted RBP16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 RNPEPL1Q9HAU8 725 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 RPRD1BQ9NQG5 326 aaKnown RBP16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 SNTG1Q9NSN8 517 aa16.53■□□□□ 0.24
SQSTM1-215ENST00000514093 ADARB2-AS1A8MUL3 147 aa16.52■□□□□ 0.24
SQSTM1-215ENST00000514093 GRK5P34947 590 aa16.52■□□□□ 0.24
SQSTM1-215ENST00000514093 MZT1Q08AG7 82 aa16.52■□□□□ 0.24
SQSTM1-215ENST00000514093 LRRC75BQ2VPJ9 315 aa16.52■□□□□ 0.24
SQSTM1-215ENST00000514093 SLC36A3Q495N2 470 aa16.52■□□□□ 0.24
SQSTM1-215ENST00000514093 NCR3LG1Q68D85 454 aa16.52■□□□□ 0.24
SQSTM1-215ENST00000514093 HCP5Q6MZN7 132 aa16.52■□□□□ 0.24
SQSTM1-215ENST00000514093 WDR82Q6UXN9 313 aa16.52■□□□□ 0.24
SQSTM1-215ENST00000514093 OR4K13Q8NH42 304 aa16.52■□□□□ 0.24
SQSTM1-215ENST00000514093 C8orf46Q8TAG6 207 aa16.52■□□□□ 0.24
SQSTM1-215ENST00000514093 NPFFR1Q9GZQ6 430 aa16.52■□□□□ 0.24
SQSTM1-215ENST00000514093 PPP1R3EQ9H7J1 279 aa16.52■□□□□ 0.24
SQSTM1-215ENST00000514093 METTL8Q9H825 291 aaKnown RBP16.52■□□□□ 0.24
SQSTM1-215ENST00000514093 MRASO14807 208 aa16.51■□□□□ 0.23
SQSTM1-215ENST00000514093 TROVE2P10155 538 aaKnown RBP eCLIP16.51■□□□□ 0.235e-7■□□□□ 10.5
SQSTM1-215ENST00000514093 SLC2A1P11166 492 aa16.51■□□□□ 0.23
SQSTM1-215ENST00000514093 OMPP47874 163 aa16.51■□□□□ 0.23
SQSTM1-215ENST00000514093 BMXP51813 675 aa16.51■□□□□ 0.23
SQSTM1-215ENST00000514093 IFI44LQ53G44 452 aa16.51■□□□□ 0.23
SQSTM1-215ENST00000514093 PGBD2Q6P3X8 592 aa16.51■□□□□ 0.23
SQSTM1-215ENST00000514093 FKBP9P1Q75LS8 142 aa16.51■□□□□ 0.23
SQSTM1-215ENST00000514093 NDUFA11Q86Y39 141 aa16.51■□□□□ 0.23
SQSTM1-215ENST00000514093 OR1M1Q8NGA1 313 aa16.51■□□□□ 0.23
SQSTM1-215ENST00000514093 OR9Q1Q8NGQ5 310 aa16.51■□□□□ 0.23
SQSTM1-215ENST00000514093 DYDC1Q8WWB3 177 aa16.51■□□□□ 0.23
SQSTM1-215ENST00000514093 SERTAD4Q9NUC0 356 aa16.51■□□□□ 0.23
SQSTM1-215ENST00000514093 MRPL22Q9NWU5 206 aaKnown RBP16.51■□□□□ 0.23
SQSTM1-215ENST00000514093 ZNF391Q9UJN7 358 aa16.51■□□□□ 0.23
SQSTM1-215ENST00000514093 A0A1W2PQ09 198 aa16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 UNC119BA6NIH7 251 aa16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 CDIPTO14735 213 aa16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 ANGPTL7O43827 346 aa16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 RENP00797 406 aa16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 HIST1H1CP16403 213 aaKnown RBP16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 CD33P20138 364 aa16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 POU1F1P28069 291 aa16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 PRKXP51817 358 aa16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 DGUOKQ16854 277 aa16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 STUMQ69YW2 141 aa16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 DUS3LQ96G46 650 aaKnown RBP16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 MEGF9Q9H1U4 602 aa16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 WDR13Q9H1Z4 485 aa16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 ZNF702PQ9H963 129 aa16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 RAB18Q9NP72 206 aa16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 SF3B6Q9Y3B4 125 aaKnown RBP16.5■□□□□ 0.23
SQSTM1-215ENST00000514093 A0A0G2JND7 137 aa16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 LOC100653049A0A140TA62 436 aa16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 OR6C68A6NDL8 312 aa16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 ANKRD30BLA7E2S9 258 aa16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 M0R1W7 72 aa16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 KRT34O76011 436 aa16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 NDUFB7P17568 137 aa16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 FGD3Q5JSP0 725 aa16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 SMARCD3Q6STE5 483 aa16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 ZBTB46Q86UZ6 589 aa16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 PIFOQ8TCI5 191 aa16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 STON2Q8WXE9 905 aa16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 HSH2DQ96JZ2 352 aa16.49■□□□□ 0.23
SQSTM1-215ENST00000514093 OR5M11Q96RB7 305 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms