RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 STMN4Q9H169 189 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 FLVCR2Q9UPI3 526 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 KPTNQ9Y664 436 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 CACNG2Q9Y698 323 aa3.62□□□□□ -1.83
HMGB1P3-201ENST00000502802 LAMA2P24043 3122 aaKnown RBP3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 DOCK3Q8IZD9 2030 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 CEP290O15078 2479 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 ERI2A8K979 691 aaKnown RBP3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 NME4O00746 187 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 TDP2O95551 362 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 EIF4EP06730 217 aaKnown RBP3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZNF17P17021 662 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 HOXB8P17481 243 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZNF138P52744 262 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 CRISP3P54108 245 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZNF121P58317 390 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 HERVK_113P61574 105 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 YWHAEP62258 255 aaKnown RBP3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 WDR82Q6UXN9 313 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 SLC35D2Q76EJ3 337 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 FAM58AQ8N1B3 248 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 KIF2BQ8N4N8 673 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 CSGALNACT2Q8N6G5 542 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 NPWQ8N729 165 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 OR4A15Q8NGL6 344 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 OR6Q1Q8NGQ2 317 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 OR13C9Q8NGT0 318 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 OR51E1Q8TCB6 317 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 BLOC1S5Q8TDH9 187 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 TCP10LQ8TDR4 215 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 DCPSQ96C86 337 aaKnown RBP3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 C19orf60Q96EN9 201 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 TMEM175Q9BSA9 504 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 CDC42EP4Q9H3Q1 356 aaKnown RBP3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 UBE2ZQ9H832 354 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 SLC39A1Q9NY26 324 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 PSG8Q9UQ74 426 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 MYH2Q9UKX2 1941 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 GAKO14976 1311 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 MED23Q9ULK4 1368 aa3.61□□□□□ -1.83
HMGB1P3-201ENST00000502802 MYO5AQ9Y4I1 1855 aaKnown RBP3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 A0A1B0GUA9 196 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 NKX2-6A6NCS4 301 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 A6NDX4 124 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 CENPXA8MT69 81 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 ERI3O43414 337 aaKnown RBP3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZNF861PO60384 105 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 SLC19A2O60779 497 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 MPDU1O75352 247 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 RHOXF2BP0C7M4 288 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 USF1P22415 310 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 CXCL5P42830 114 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 RGS19P49795 217 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 LHX2P50458 406 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 XIAPP98170 497 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 C5orf64Q2M2E5 130 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 RSPO1Q2MKA7 263 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 PIGGQ5H8A4 983 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 HES5Q5TA89 166 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 ASCL4Q6XD76 172 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 LINC00336Q6ZUF6 198 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 ABHD12BQ7Z5M8 362 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZNF429Q86V71 674 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 UNC93AQ86WB7 457 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 FAM71AQ8IYT1 594 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 ARHGAP18Q8N392 663 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 SNX31Q8N9S9 440 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 Q8N9W7 124 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 OR8K3Q8NH51 312 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 TMEM158Q8WZ71 300 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 ELSPBP1Q96BH3 223 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 NRBF2Q96F24 287 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 DYNLL2Q96FJ2 89 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 GALNT14Q96FL9 552 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 RNF185Q96GF1 192 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 GPR21Q99679 349 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 RHOXF2Q9BQY4 288 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 SLC25A2Q9BXI2 301 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 PARP12Q9H0J9 701 aaKnown RBP3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 ISYNA1Q9NPH2 558 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 FAM49BQ9NUQ9 324 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 UVRAGQ9P2Y5 699 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZMAT5Q9UDW3 170 aaKnown RBP3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 RBBP6Q7Z6E9 1792 aaKnown RBP3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 ZSWIM8A7E2V4 1837 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 MGAMO43451 1857 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 PTPRFP10586 1907 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 SCN2AQ99250 2005 aa3.6□□□□□ -1.83
HMGB1P3-201ENST00000502802 GSTTP1A0A1W2PQM5 241 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 A0A1W2PRF3 423 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 A0A1W2PRM7 423 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 CD5LO43866 347 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 SS18L1O75177 396 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 RDH16O75452 317 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 ETHE1O95571 254 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 KLK1P06870 262 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 IL32P24001 234 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 RAB7AP51149 207 aa3.59□□□□□ -1.83
HMGB1P3-201ENST00000502802 CLDN6P56747 220 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms