RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 OR2T12Q8NG77 320 aa13.12□□□□□ -0.31
DDX56-210ENST00000479440 OR56B2PQ8NGI1 322 aa13.12□□□□□ -0.31
DDX56-210ENST00000479440 OR2AE1Q8NHA4 323 aa13.12□□□□□ -0.31
DDX56-210ENST00000479440 RSRC1Q96IZ7 334 aaKnown RBP13.12□□□□□ -0.31
DDX56-210ENST00000479440 CYB5R1Q9UHQ9 305 aa13.12□□□□□ -0.31
DDX56-210ENST00000479440 RAB21Q9UL25 225 aa13.12□□□□□ -0.31
DDX56-210ENST00000479440 B9D1Q9UPM9 204 aa13.12□□□□□ -0.31
DDX56-210ENST00000479440 SF3B6Q9Y3B4 125 aaKnown RBP13.12□□□□□ -0.31
DDX56-210ENST00000479440 A0A1W2PQ09 198 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 ANKRD30BLA7E2S9 258 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 FXYD1O00168 92 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 ACOT8O14734 319 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 TIPRLO75663 272 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 HLA-DQA2P01906 255 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 TROVE2P10155 538 aaKnown RBP eCLIP13.11□□□□□ -0.31
DDX56-210ENST00000479440 PAICSP22234 425 aaKnown RBP13.11□□□□□ -0.31
DDX56-210ENST00000479440 NAA10P41227 235 aaPredicted RBP13.11□□□□□ -0.31
DDX56-210ENST00000479440 GLYATL3Q5SZD4 288 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 ZBTB37Q5TC79 503 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 DRAM2Q6UX65 266 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 DPY19L4Q7Z388 723 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 VTCN1Q7Z7D3 282 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 CYP4Z1Q86W10 505 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 OR4C15Q8NGM1 316 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 NKX3-1Q99801 234 aaPredicted RBP13.11□□□□□ -0.31
DDX56-210ENST00000479440 TMEM120AQ9BXJ8 343 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 DNTTIP1Q9H147 329 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 TMBIM4Q9HC24 238 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 KCNG2Q9UJ96 466 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 SNX13Q9Y5W8 968 aa13.11□□□□□ -0.31
DDX56-210ENST00000479440 K7EIL1 84 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 PTP4A3O75365 173 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 NPPAP01160 153 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 CD28P10747 220 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 GSK3BP49841 420 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 ELF3P78545 371 aaPredicted RBP13.1□□□□□ -0.31
DDX56-210ENST00000479440 IFI44LQ53G44 452 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 COQ5Q5HYK3 327 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 STUMQ69YW2 141 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 CRIP3Q6Q6R5 217 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 WDR82Q6UXN9 313 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 OR6V1Q8N148 313 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 OR5D13Q8NGL4 314 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 DYDC1Q8WWB3 177 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 OCSTAMPQ9BR26 566 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 MEGF9Q9H1U4 602 aa13.1□□□□□ -0.31
DDX56-210ENST00000479440 SRA1Q9HD15 236 aaKnown RBP13.1□□□□□ -0.31
DDX56-210ENST00000479440 BBIP1A8MTZ0 92 aa13.09□□□□□ -0.31
DDX56-210ENST00000479440 MRASO14807 208 aa13.09□□□□□ -0.31
DDX56-210ENST00000479440 XRCC2O43543 280 aa13.09□□□□□ -0.31
DDX56-210ENST00000479440 ANGPTL7O43827 346 aa13.09□□□□□ -0.31
DDX56-210ENST00000479440 PEX14O75381 377 aa13.09□□□□□ -0.31
DDX56-210ENST00000479440 ZNF682O95780 498 aa13.09□□□□□ -0.31
DDX56-210ENST00000479440 IGLL1P15814 213 aa13.09□□□□□ -0.31
DDX56-210ENST00000479440 FAHP16930 419 aa13.09□□□□□ -0.31
DDX56-210ENST00000479440 DDOSTP39656 456 aa13.09□□□□□ -0.31
DDX56-210ENST00000479440 OR1M1Q8NGA1 313 aa13.09□□□□□ -0.31
DDX56-210ENST00000479440 OR9Q1Q8NGQ5 310 aa13.09□□□□□ -0.31
DDX56-210ENST00000479440 RORBQ92753 470 aa13.09□□□□□ -0.31
DDX56-210ENST00000479440 ERMAPQ96PL5 475 aaPredicted RBP13.09□□□□□ -0.31
DDX56-210ENST00000479440 RPRD1BQ9NQG5 326 aaKnown RBP13.09□□□□□ -0.31
DDX56-210ENST00000479440 SLC25A10Q9UBX3 287 aaPredicted RBP13.09□□□□□ -0.31
DDX56-210ENST00000479440 CAPN7Q9Y6W3 813 aa13.09□□□□□ -0.31
DDX56-210ENST00000479440 H0YAE9 185 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.08□□□□□ -0.32
DDX56-210ENST00000479440 CHST1O43916 411 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 SELLP14151 372 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 OTX1P32242 354 aaPredicted RBP13.08□□□□□ -0.32
DDX56-210ENST00000479440 TGM4P49221 684 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 SLC7A2P52569 658 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 FXYD6P3P58550 94 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 CSNK2BP67870 215 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 CD69Q07108 199 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 FGD3Q5JSP0 725 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 ATPAF1Q5TC12 328 aaPredicted RBP13.08□□□□□ -0.32
DDX56-210ENST00000479440 SMARCD3Q6STE5 483 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 FKBP9P1Q75LS8 142 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 WDR86Q86TI4 376 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 ZBTB46Q86UZ6 589 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 PAPD5Q8NDF8 572 aaKnown RBP13.08□□□□□ -0.32
DDX56-210ENST00000479440 FANK1Q8TC84 345 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 C17orf50Q8WW18 174 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 MED30Q96HR3 178 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 MAP6Q96JE9 813 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 NMNAT3Q96T66 252 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 CITED2Q99967 270 aaPredicted RBP13.08□□□□□ -0.32
DDX56-210ENST00000479440 COPS4Q9BT78 406 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 NSRP1Q9H0G5 558 aaKnown RBP13.08□□□□□ -0.32
DDX56-210ENST00000479440 ZNF702PQ9H963 129 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 MRGBPQ9NV56 204 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 ADA2Q9NZK5 511 aa13.08□□□□□ -0.32
DDX56-210ENST00000479440 A0A1W2PRQ8 180 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 UNC119BA6NIH7 251 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 ADARB2-AS1A8MUL3 147 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 ZNF823P16415 610 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 NDUFB7P17568 137 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 POU1F1P28069 291 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 SLC6A6P31641 620 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 OMPP47874 163 aa13.07□□□□□ -0.32
DDX56-210ENST00000479440 BMXP51813 675 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms