RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 MRPL40Q9NQ50 206 aaKnown RBP2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 XPNPEP1Q9NQW7 623 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 MRM2Q9UI43 246 aaKnown RBP2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 YARS2Q9Y2Z4 477 aaKnown RBP2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 SAMHD1Q9Y3Z3 626 aaKnown RBP2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 MYOFQ9NZM1 2061 aa2.89□□□□□ -1.95
HMGB1P25-201ENST00000468402 ANKRD12Q6UB98 2062 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 VWA8A3KMH1 1905 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 ANKRD36A6QL64 1941 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 PTPRSQ13332 1948 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 A0A087WYN8 130 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 A0A0G2JRQ6 117 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 SEC14L6B5MCN3 397 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 LRRN3E7EW58 273 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 KLRC4-KLRK1H3BQV0 150 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 SMLR1H3BR10 107 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 K7N7A8 449 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 CDC7O00311 574 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 SULT1C2O00338 296 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 EMC8O43402 210 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 HCRTO43612 131 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 MPDU1O75352 247 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 EEDO75530 441 aaKnown RBP2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 PSMG1O95456 288 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 APOEP02649 317 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 FGF1P05230 155 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 KLK1P06870 262 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 SERPINA6P08185 405 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 IGLL1P15814 213 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 CNR1P21554 472 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 AQP1P29972 269 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 GLP1RP43220 463 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 HSPA13P48723 471 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 RGS6P49758 472 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 RAP1GDS1P52306 607 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR2B6P58173 313 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 MLF1P58340 268 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 LMO4P61968 165 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 CXCL6P80162 114 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 GLO1Q04760 184 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 C2orf54Q08AI8 447 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 MADCAM1Q13477 382 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 ARFRP1Q13795 201 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 SPA17Q15506 151 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 GABRA6Q16445 453 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 EXOC3L4Q17RC7 722 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 GOLGA7BQ2TAP0 167 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 KRTAP24-1Q3LI83 254 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 OLFML2AQ68BL7 652 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 ASCL4Q6XD76 172 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF621Q6ZSS3 439 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 SLC25A48Q6ZT89 311 aaKnown RBP2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 COX15Q7KZN9 410 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 ABHD13Q7L211 337 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 MOB1BQ7L9L4 216 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR2W3Q7Z3T1 314 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 CMC1Q7Z7K0 106 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 AKAP14Q86UN6 197 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 UNC93AQ86WB7 457 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 PPP1R27Q86WC6 154 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 C9orf106Q8NAJ2 232 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 OR6K6Q8NGW6 343 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 RHOXF1Q8NHV9 184 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 NDRG1Q92597 394 aaKnown RBP2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 NEIL2Q969S2 332 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 CPNE4Q96A23 557 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 FAIM2Q9BWQ8 316 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 MRPS26Q9BYN8 205 aaKnown RBP2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 SELENOIQ9C0D9 397 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 RACGAP1Q9H0H5 632 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 SYT4Q9H2B2 425 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 NXF3Q9H4D5 531 aaKnown RBP2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 ARMC7Q9H6L4 198 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 GNB4Q9HAV0 340 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 RETNQ9HD89 108 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 SLC40A1Q9NP59 571 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 NECAP2Q9NVZ3 263 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 HRASLS2Q9NWW9 162 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 STMN3Q9NZ72 180 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 CCDC59Q9P031 241 aaKnown RBP2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 BTNL2Q9UIR0 455 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 C3orf18Q9UK00 162 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 GOLT1BQ9Y3E0 138 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 PTPRJQ12913 1337 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 IGSF9BQ9UPX0 1349 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 ATG2BQ96BY7 2078 aa2.88□□□□□ -1.95
HMGB1P25-201ENST00000468402 ALPK3Q96L96 1907 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF236Q9UL36 1845 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 PVALEFA0A1B0GWK0 134 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 ZNF99A8MXY4 864 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 MKRN2OSH3BPM6 223 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 M0R036 132 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 DENRO43583 198 aaKnown RBP2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 ENSAO43768 121 aaKnown RBP2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 LYPLA1O75608 230 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 SC5DO75845 299 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 NSA2O95478 260 aaKnown RBP2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 RAB3DO95716 219 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 IGHV2-5P01817 119 aa2.87□□□□□ -1.95
HMGB1P25-201ENST00000468402 SERPINA5P05154 406 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms