RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 INTS1Q8N201 2190 aaKnown RBP5.11□□□□□ -1.59
USP39-213ENST00000467885 FLNCQ14315 2725 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 hCG_38984A0A1B0GV85 526 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.1□□□□□ -1.59
USP39-213ENST00000467885 A0A1B0GWJ7 208 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 A0A1W2PPR1 153 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 A6NIN4 97 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 CD300LBA8K4G0 201 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 E7EQL1 145 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 H3BSH0 61 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 J3QW42 95 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 GABRPO00591 440 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 ABCD4O14678 606 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 TBX1O43435 398 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 SYT7O43581 403 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 AIREO43918 545 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 GMDSO60547 372 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 GATBO75879 557 aaKnown RBP5.1□□□□□ -1.59
USP39-213ENST00000467885 UBR5O95071 2799 aaPredicted RBP5.1□□□□□ -1.59
USP39-213ENST00000467885 ALX3O95076 343 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 RAF1P04049 648 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 UCHL1P09936 223 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 RAC2P15153 192 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 ZNF250P15622 560 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 IGFBP3P17936 291 aaPredicted RBP5.1□□□□□ -1.59
USP39-213ENST00000467885 SRMP19623 302 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 ACHEP22303 614 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 PSMA1P25786 263 aaKnown RBP5.1□□□□□ -1.59
USP39-213ENST00000467885 HOXC12P31275 282 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 RPS19P39019 145 aaKnown RBP5.1□□□□□ -1.59
USP39-213ENST00000467885 MPV17P39210 176 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 DDOSTP39656 456 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 SLC6A9P48067 706 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 SPOCK1Q08629 439 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 CACNA1CQ13936 2221 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 TRAM1Q15629 374 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 Q499Y3 187 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 OXLD1Q5BKU9 147 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 ZMAT1Q5H9K5 638 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 FAM27D1Q5T7N8 215 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 BCL2L15Q5TBC7 163 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 MBNL2Q5VZF2 373 aaKnown RBP5.1□□□□□ -1.59
USP39-213ENST00000467885 TMEM42Q69YG0 159 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 CRIP3Q6Q6R5 217 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 DOK3Q7L591 496 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 RNF144BQ7Z419 303 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 LRP11Q86VZ4 500 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 LYPD6Q86Y78 171 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 CLVS1Q8IUQ0 354 aaPredicted RBP5.1□□□□□ -1.59
USP39-213ENST00000467885 SERPINA12Q8IW75 414 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 PARP16Q8N5Y8 322 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 ZNF676Q8N7Q3 588 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 NUP37Q8NFH4 326 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 OR1J1Q8NGS3 322 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 PHYHIPQ92561 330 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 NEUROG1Q92886 237 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 REEP6Q96HR9 211 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 RADILQ96JH8 1075 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 PCNX1Q96RV3 2341 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 CHCHD6Q9BRQ6 235 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 BCL2L14Q9BZR8 327 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 OR2J1Q9GZK6 312 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 OR51B6Q9H340 312 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 RGCCQ9H4X1 137 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 ESRP2Q9H6T0 727 aaKnown RBP5.1□□□□□ -1.59
USP39-213ENST00000467885 NOX4Q9NPH5 578 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 PTTG3PQ9NZH4 202 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 NDUFA13Q9P0J0 144 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 ENPP5Q9UJA9 477 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 ZNF391Q9UJN7 358 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 STUB1Q9UNE7 303 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 SSR3Q9UNL2 185 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 RHBDD3Q9Y3P4 386 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 ADGRG4Q8IZF6 3080 aa5.1□□□□□ -1.59
USP39-213ENST00000467885 PRR14LQ5THK1 2151 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 IGLV3-9A0A075B6K5 115 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 TRAV8-7A0A075B6U6 113 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 TRAV1-2A0A0B4J238 106 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 IGKV1-9A0A0C4DH69 117 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 SMIM31A0A1B0GVY4 71 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 ATP6V1G2-DDX39BF2Z307 99 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 ZNF701M0R085 212 aaPredicted RBP5.09□□□□□ -1.59
USP39-213ENST00000467885 XRCC2O43543 280 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 PEX14O75381 377 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 MTRF1O75570 445 aaKnown RBP5.09□□□□□ -1.59
USP39-213ENST00000467885 DHRS3O75911 302 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 GABARAPO95166 117 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 SERPINA3P01011 423 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 CST4P01036 141 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 IGHV3-13P01766 116 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 OCM2P0CE71 109 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 UBCP0CG48 685 aaKnown RBP5.09□□□□□ -1.59
USP39-213ENST00000467885 ADRA2CP18825 462 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 KITLGP21583 273 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 TGFBR1P36897 503 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 PEX19P40855 299 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 SOX2P48431 317 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 VBP1P61758 197 aa5.09□□□□□ -1.59
USP39-213ENST00000467885 LSM3P62310 102 aaKnown RBP5.09□□□□□ -1.59
USP39-213ENST00000467885 RIPPLY1Q0D2K3 151 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms