RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 GABPB1Q06547 395 aaPredicted RBP10.86□□□□□ -0.67
COL5A1-206ENST00000465877 MFGE8Q08431 387 aaPredicted RBP10.86□□□□□ -0.67
COL5A1-206ENST00000465877 TMED1Q13445 227 aa10.86□□□□□ -0.67
COL5A1-206ENST00000465877 RCN1Q15293 331 aa10.86□□□□□ -0.67
COL5A1-206ENST00000465877 ZMYND11Q15326 602 aa10.86□□□□□ -0.67
COL5A1-206ENST00000465877 ZNF181Q2M3W8 571 aa10.86□□□□□ -0.67
COL5A1-206ENST00000465877 CHRFAM7AQ494W8 412 aa10.86□□□□□ -0.67
COL5A1-206ENST00000465877 PLEKHG7Q6ZR37 379 aa10.86□□□□□ -0.67
COL5A1-206ENST00000465877 SSX6Q7RTT6 188 aa10.86□□□□□ -0.67
COL5A1-206ENST00000465877 GLCCI1Q86VQ1 547 aa10.86□□□□□ -0.67
COL5A1-206ENST00000465877 FTMTQ8N4E7 242 aa10.86□□□□□ -0.67
COL5A1-206ENST00000465877 SPICQ8N5J4 248 aa10.86□□□□□ -0.67
COL5A1-206ENST00000465877 OR51F2Q8NH61 342 aa10.86□□□□□ -0.67
COL5A1-206ENST00000465877 Q8TCH9 128 aa10.86□□□□□ -0.67
COL5A1-206ENST00000465877 TRUB1Q8WWH5 349 aaKnown RBP10.86□□□□□ -0.67
COL5A1-206ENST00000465877 PAPOLGQ9BWT3 736 aaKnown RBP10.86□□□□□ -0.67
COL5A1-206ENST00000465877 MOB1AQ9H8S9 216 aa10.86□□□□□ -0.67
COL5A1-206ENST00000465877 LPAR3Q9UBY5 353 aa10.86□□□□□ -0.67
COL5A1-206ENST00000465877 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL5A1-206ENST00000465877 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.85□□□□□ -0.67
COL5A1-206ENST00000465877 A0A0U1RQV5 110 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 LRRC30A6NM36 301 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 ANKRD65E5RJM6 399 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 LOC110117498-PIK3R3F6TDL0 507 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 FAM20BO75063 409 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 ENTPD6O75354 484 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 SRSF10O75494 262 aaKnown RBP10.85□□□□□ -0.67
COL5A1-206ENST00000465877 IRF2P14316 349 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 ANPEPP15144 967 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 ACKR3P25106 362 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 PEX2P28328 305 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 MDH2P40926 338 aaKnown RBP10.85□□□□□ -0.67
COL5A1-206ENST00000465877 MTNR1AP48039 350 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 DVL1P1P54792 670 aaPredicted RBP10.85□□□□□ -0.67
COL5A1-206ENST00000465877 SNRPGP62308 76 aaKnown RBP10.85□□□□□ -0.67
COL5A1-206ENST00000465877 EGR3Q06889 387 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 MPPED2Q15777 294 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 SNCBQ16143 134 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 TMEM155Q4W5P6 130 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 IL17RELQ6ZVW7 336 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 COMMD2Q86X83 199 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 KLBQ86Z14 1044 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 C1orf87Q8N0U7 546 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 MUC20Q8N307 709 aaPredicted RBP10.85□□□□□ -0.67
COL5A1-206ENST00000465877 KLHL36Q8N4N3 616 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 CSNK2A3Q8NEV1 391 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 OR10H4Q8NGA5 316 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 OR8S1Q8NH09 359 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 UBE2FQ969M7 185 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 ERGIC1Q969X5 290 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 LYZL4Q96KX0 146 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 RDH12Q96NR8 316 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 APOL4Q9BPW4 351 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 PBOV1Q9GZY1 135 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 UFSP2Q9NUQ7 469 aa10.85□□□□□ -0.67
COL5A1-206ENST00000465877 SMPD3Q9NY59 655 aaPredicted RBP10.85□□□□□ -0.67
COL5A1-206ENST00000465877 NUFIP1Q9UHK0 495 aaKnown RBP10.85□□□□□ -0.67
COL5A1-206ENST00000465877 MRM2Q9UI43 246 aaKnown RBP10.85□□□□□ -0.67
COL5A1-206ENST00000465877 A0A1W2PQL4 384 aaPredicted RBP10.84□□□□□ -0.67
COL5A1-206ENST00000465877 ACOD1A6NK06 481 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 MAGEB4O15481 346 aaPredicted RBP10.84□□□□□ -0.67
COL5A1-206ENST00000465877 IGLV3-1P01715 115 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 HNF1AP20823 631 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 ATP6V1E1P36543 226 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 GNALP38405 381 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 CR1LQ2VPA4 569 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 FAM120AOSQ5T036 256 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 BCL2L15Q5TBC7 163 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 MEDAGQ5VYS4 303 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 WDR86Q86TI4 376 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 ENTHD1Q8IYW4 607 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 SPERTQ8NA61 448 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 OR11L1Q8NGX0 322 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 TMEM186Q96B77 213 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 ITPKCQ96DU7 683 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 RNFT2Q96EX2 444 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 SHARPINQ9H0F6 387 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 FN3KRPQ9HA64 309 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 C14orf119Q9NWQ9 140 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 HIF1ANQ9NWT6 349 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 GTF2A1LQ9UNN4 478 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 RHBDD3Q9Y3P4 386 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 R4GMQ9 66 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 ARHGAP32A7KAX9 2087 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 DOCK11Q5JSL3 2073 aa10.84□□□□□ -0.67
COL5A1-206ENST00000465877 WNK2Q9Y3S1 2297 aa10.83□□□□□ -0.68
COL5A1-206ENST00000465877 TRAV20A0A0B4J274 112 aa10.83□□□□□ -0.68
COL5A1-206ENST00000465877 LOC100130705A0A1B0GUX0 176 aa10.83□□□□□ -0.68
COL5A1-206ENST00000465877 A6NLC8 198 aa10.83□□□□□ -0.68
COL5A1-206ENST00000465877 CEACAM18A8MTB9 384 aa10.83□□□□□ -0.68
COL5A1-206ENST00000465877 F5H0A9 414 aaPredicted RBP10.83□□□□□ -0.68
COL5A1-206ENST00000465877 ZNF205O95201 554 aa10.83□□□□□ -0.68
COL5A1-206ENST00000465877 PNPP00491 289 aa10.83□□□□□ -0.68
COL5A1-206ENST00000465877 TTRP02766 147 aa10.83□□□□□ -0.68
COL5A1-206ENST00000465877 KRT8P05787 483 aa10.83□□□□□ -0.68
COL5A1-206ENST00000465877 OR2T7P0C7T2 308 aa10.83□□□□□ -0.68
COL5A1-206ENST00000465877 GABRB1P18505 474 aa10.83□□□□□ -0.68
COL5A1-206ENST00000465877 PCMT1P22061 227 aa10.83□□□□□ -0.68
COL5A1-206ENST00000465877 PMELP40967 661 aa10.83□□□□□ -0.68
COL5A1-206ENST00000465877 ACTC1P68032 377 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms