RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 SULT1C4O75897 302 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 PTBP3O95758 552 aaKnown RBP10.04□□□□□ -0.8
VPS52-213ENST00000461743 KRT8P05787 483 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 LYNX1P0DP58 116 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 ATP6V1B1P15313 513 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 ATP6V1E1P36543 226 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 RIPPLY3P57055 190 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 FAM3AP98173 230 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 IL18R1Q13478 541 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 MED21Q13503 144 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 TTC23Q5W5X9 447 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 ENTHD1Q8IYW4 607 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 SETD9Q8NE22 299 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 OR10AD1Q8NGE0 317 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 OR8B12Q8NGG6 310 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 OR56B2PQ8NGI1 322 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 ITLN1Q8WWA0 313 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 RAB1CQ92928 201 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 DGCR14Q96DF8 476 aaKnown RBP10.04□□□□□ -0.8
VPS52-213ENST00000461743 MRPL48Q96GC5 212 aaKnown RBP10.04□□□□□ -0.8
VPS52-213ENST00000461743 C1orf159Q96HA4 380 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 MEGF10Q96KG7 1140 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 FAM206AQ9NX38 181 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 PPP1R3CQ9UQK1 317 aa10.04□□□□□ -0.8
VPS52-213ENST00000461743 ANKRD30BLA7E2S9 258 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 PRR32B1ATL7 298 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 DLGAP1O14490 977 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 CDC14BO60729 498 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 ENTPD6O75354 484 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 FSTL3O95633 263 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 IGLV3-1P01715 115 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 SMIM18P0DKX4 95 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 IGHV4-31P0DP07 118 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 ANOS1P23352 680 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 GSK3AP49840 483 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 OR8G1Q15617 311 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 C6orf52Q5T4I8 152 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 ZBTB37Q5TC79 503 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 PLEKHG7Q6ZR37 379 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 KRT74Q7RTS7 529 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 FAM220AQ7Z4H9 259 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 C1orf87Q8N0U7 546 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 RFLNBQ8N5W9 214 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 MAPK1IP1LQ8NDC0 245 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 OR10H4Q8NGA5 316 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 RHOXF1Q8NHV9 184 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 Q8TCH9 128 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 SGK3Q96BR1 496 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 RAB39BQ96DA2 213 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 SMR3AQ99954 134 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 MRPS26Q9BYN8 205 aaKnown RBP10.03□□□□□ -0.8
VPS52-213ENST00000461743 GSX1Q9H4S2 264 aaPredicted RBP10.03□□□□□ -0.8
VPS52-213ENST00000461743 Q9H521 79 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 GCM1Q9NP62 436 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 INPP5EQ9NRR6 644 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 TMEM106BQ9NUM4 274 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 TMEM160Q9NX00 188 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 WIPI2Q9Y4P8 454 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 SNX5Q9Y5X3 404 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 R4GMQ9 66 aa10.03□□□□□ -0.8
VPS52-213ENST00000461743 A0A1W2PQL4 384 aaPredicted RBP10.02□□□□□ -0.81
VPS52-213ENST00000461743 C5orf63A6NC05 138 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 LRRC30A6NM36 301 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 DHRS7CA6NNS2 312 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 F5H5P2 479 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 LOC110117498-PIK3R3F6TDL0 507 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 H0YAE9 185 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 J3QRE1 110 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 SRSF10O75494 262 aaKnown RBP10.02□□□□□ -0.81
VPS52-213ENST00000461743 DBTP11182 482 aaKnown RBP10.02□□□□□ -0.81
VPS52-213ENST00000461743 CPT2P23786 658 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 RPL5P46777 297 aaKnown RBP10.02□□□□□ -0.81
VPS52-213ENST00000461743 HCCSP53701 268 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 ACTA2P62736 377 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 ACTG2P63267 376 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 ZNF91Q05481 1191 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 RAB40BQ12829 278 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 ZNF684Q5T5D7 378 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 BCL2L15Q5TBC7 163 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 ZNF691Q5VV52 312 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 LPCAT4Q643R3 524 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 CYB5R2Q6BCY4 276 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 KCTD20Q7Z5Y7 419 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 MUC20Q8N307 709 aaPredicted RBP10.02□□□□□ -0.81
VPS52-213ENST00000461743 CCDC54Q8NEL0 328 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 CLDND2Q8NHS1 167 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 CCL17Q92583 94 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 RNFT2Q96EX2 444 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 PBOV1Q9GZY1 135 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 BRD7Q9NPI1 651 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 C14orf119Q9NWQ9 140 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 MRM2Q9UI43 246 aaKnown RBP10.02□□□□□ -0.81
VPS52-213ENST00000461743 EXOGQ9Y2C4 368 aaKnown RBP10.02□□□□□ -0.81
VPS52-213ENST00000461743 N6AMT1Q9Y5N5 214 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 MPC1Q9Y5U8 109 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 NPTNQ9Y639 398 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 HSPE1-MOB4S4R3N1 261 aa10.02□□□□□ -0.81
VPS52-213ENST00000461743 IRGMA1A4Y4 181 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 METTL15A6NJ78 407 aa10.01□□□□□ -0.81
VPS52-213ENST00000461743 H0YL77 283 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms