RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 PRELID2Q8N945 189 aa4.41□□□□□ -1.7
EPHA3-202ENST00000452448 HJURPQ8NCD3 748 aaPredicted RBP4.41□□□□□ -1.7
EPHA3-202ENST00000452448 REPS2Q8NFH8 660 aa4.41□□□□□ -1.7
EPHA3-202ENST00000452448 MDGA1Q8NFP4 955 aa4.41□□□□□ -1.7
EPHA3-202ENST00000452448 OR52E4Q8NGH9 312 aa4.41□□□□□ -1.7
EPHA3-202ENST00000452448 OR9I1Q8NGQ6 314 aa4.41□□□□□ -1.7
EPHA3-202ENST00000452448 OR2A12Q8NGT7 310 aa4.41□□□□□ -1.7
EPHA3-202ENST00000452448 SAP25Q8TEE9 199 aa4.41□□□□□ -1.7
EPHA3-202ENST00000452448 FLYWCH2Q96CP2 140 aaKnown RBP4.41□□□□□ -1.7
EPHA3-202ENST00000452448 RNF157Q96PX1 679 aa4.41□□□□□ -1.7
EPHA3-202ENST00000452448 NKX3-1Q99801 234 aaPredicted RBP4.41□□□□□ -1.7
EPHA3-202ENST00000452448 HIST1H2BLQ99880 126 aa4.41□□□□□ -1.7
EPHA3-202ENST00000452448 MIEN1Q9BRT3 115 aa4.41□□□□□ -1.7
EPHA3-202ENST00000452448 C20orf27Q9GZN8 174 aa4.41□□□□□ -1.7
EPHA3-202ENST00000452448 BARX1Q9HBU1 254 aaPredicted RBP4.41□□□□□ -1.7
EPHA3-202ENST00000452448 DLL4Q9NR61 685 aa4.41□□□□□ -1.7
EPHA3-202ENST00000452448 ARL15Q9NXU5 204 aa4.41□□□□□ -1.7
EPHA3-202ENST00000452448 ZNF107Q9UII5 783 aaPredicted RBP4.41□□□□□ -1.7
EPHA3-202ENST00000452448 ZNF638Q14966 1978 aaKnown RBP4.41□□□□□ -1.7
EPHA3-202ENST00000452448 BRCA1P38398 1863 aaKnown RBP4.41□□□□□ -1.7
EPHA3-202ENST00000452448 LTBP1Q14766 1721 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 A0A1B0GU03 582 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 WNT10BO00744 389 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 PLA2G10O15496 165 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 TYROBPO43914 113 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 ENTPD6O75354 484 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 SEMA4FO95754 770 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 TMEM50AO95807 157 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 CTSDP07339 412 aaPredicted RBP4.4□□□□□ -1.7
EPHA3-202ENST00000452448 MMP7P09237 267 aaPredicted RBP4.4□□□□□ -1.7
EPHA3-202ENST00000452448 FURINP09958 794 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 HSD17B1P14061 328 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 CCKBRP32239 447 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 CD68P34810 354 aaPredicted RBP4.4□□□□□ -1.7
EPHA3-202ENST00000452448 CDKN2BP42772 138 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 OR3A4PP47883 348 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 AMTP48728 403 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 LILRA4P59901 499 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 TLE3Q04726 772 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 DUSP2Q05923 314 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 PIGFQ07326 219 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 ZNF266Q14584 549 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 TGIF1Q15583 401 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 IQCJQ1A5X6 159 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 EIF5AL1Q6IS14 154 aaKnown RBP4.4□□□□□ -1.7
EPHA3-202ENST00000452448 ADGRF3Q8IZF5 1079 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 FGFRL1Q8N441 504 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 D2HGDHQ8N465 521 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 LINC00471Q8N535 108 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 TMEM217Q8N7C4 229 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 PNPLA1Q8N8W4 532 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 LFNGQ8NES3 379 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 OR4D11Q8NGI4 311 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 OR4A16Q8NH70 328 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 EEF1AKMT1Q8WVE0 214 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 ORAI1Q96D31 301 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 LYSMD1Q96S90 227 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 ABHD14AQ9BUJ0 271 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 SMIM3Q9BZL3 60 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 OR8D2Q9GZM6 311 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 COA1Q9GZY4 146 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 ATG10Q9H0Y0 220 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 ZBP1Q9H171 429 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 ENY2Q9NPA8 101 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 NLKQ9UBE8 527 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 TIMM13Q9Y5L4 95 aaPredicted RBP4.4□□□□□ -1.7
EPHA3-202ENST00000452448 V9GYH0 126 aa4.4□□□□□ -1.7
EPHA3-202ENST00000452448 SIPA1L1O43166 1804 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 LOC105369274A0A096LPK9 316 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 LOC102723532A0A0G2JNH3 316 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 C13orf42A0A1B0GVH6 325 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 SHISA7A6NL88 538 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 HIDE1A8MVS5 230 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 HCRTR1O43613 425 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 OR1F1O43749 312 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 FARS2O95363 451 aaKnown RBP4.4□□□□□ -1.71
EPHA3-202ENST00000452448 GRPP07492 148 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 OR5AC1P0C628 307 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 FTH1P19P0C7X4 201 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 HIST1H1EP10412 219 aaKnown RBP4.4□□□□□ -1.71
EPHA3-202ENST00000452448 CXCL2P19875 107 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 CHATP28329 748 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 GRPRP30550 384 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 PNPLA4P41247 253 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 GABRA2P47869 451 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 AQP5P55064 265 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 OR10A3P58181 314 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 AKR1C1Q04828 323 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 PCOLCEQ15113 449 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 RHEBQ15382 184 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 ZNF79Q15937 498 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 ZNF787Q6DD87 383 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 C22orf42Q6IC83 251 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 RPL22L1Q6P5R6 122 aaKnown RBP4.4□□□□□ -1.71
EPHA3-202ENST00000452448 GJB7Q6PEY0 223 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 CBLN3Q6UW01 205 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 LYPD4Q6UWN0 246 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 TMPRSS11AQ6ZMR5 421 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 FRRS1Q6ZNA5 592 aa4.4□□□□□ -1.71
EPHA3-202ENST00000452448 ZNF683Q8IZ20 524 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms