RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CNTD2Q9H8S5 307 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 TMEM138Q9NPI0 162 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 TAS2R8Q9NYW2 309 aa9.4□□□□□ -0.9
PKP4-206ENST00000452162 MRPS18CQ9Y3D5 142 aaKnown RBP9.4□□□□□ -0.9
PKP4-206ENST00000452162 FLNCQ14315 2725 aa9.4□□□□□ -0.91
PKP4-206ENST00000452162 A0A0A6YYH2 397 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 A0A1B0GUH1 482 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 A6NJ64 397 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 ARPC1BO15143 372 aaKnown RBP9.39□□□□□ -0.91
PKP4-206ENST00000452162 DHHO43323 396 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 NDUFB6O95139 128 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 TGM6O95932 706 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 HPXP02790 462 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 PLA2G2AP14555 144 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 CXCL3P19876 107 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 RAB6AP20340 208 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 GNALP38405 381 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 MECP2P51608 486 aaKnown RBP9.39□□□□□ -0.91
PKP4-206ENST00000452162 CAPZA1P52907 286 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 HIST1H3AP68431 136 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 FOXO1Q12778 655 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 SMUG1Q53HV7 270 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 HIST2H3PS2Q5TEC6 136 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 HIST2H3AQ71DI3 136 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 C20orf196Q8IYI0 205 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 ASCC1Q8N9N2 400 aaKnown RBP9.39□□□□□ -0.91
PKP4-206ENST00000452162 ZFP62Q8NB50 900 aaPredicted RBP9.39□□□□□ -0.91
PKP4-206ENST00000452162 OR4C16Q8NGL9 310 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 INTS12Q96CB8 462 aaKnown RBP9.39□□□□□ -0.91
PKP4-206ENST00000452162 ADGRG7Q96K78 797 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 SOX7Q9BT81 388 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 METTL17Q9H7H0 456 aaPredicted RBP9.39□□□□□ -0.91
PKP4-206ENST00000452162 BEX1Q9HBH7 125 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 FBXO9Q9UK97 447 aaPredicted RBP9.39□□□□□ -0.91
PKP4-206ENST00000452162 GCN1Q92616 2671 aaKnown RBP9.39□□□□□ -0.91
PKP4-206ENST00000452162 SULT1C2O00338 296 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 ICMTO60725 284 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 RAB3AP20336 220 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 QRFPP83859 136 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 CCDC92Q53HC0 331 aaPredicted RBP9.39□□□□□ -0.91
PKP4-206ENST00000452162 OR10K2Q6IF99 312 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 SEZ6L2Q6UXD5 910 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 SLC22A24Q8N4F4 322 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 OR5D14Q8NGL3 314 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 FAM173AQ9BQD7 235 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 UQCC2Q9BRT2 126 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 NOX3Q9HBY0 568 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 GPR84Q9NQS5 396 aa9.39□□□□□ -0.91
PKP4-206ENST00000452162 MEIKINA0A087WXM9 373 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 ZNF716A6NP11 495 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 FABP7O15540 132 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 IGLV3-1P01715 115 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 CRYABP02511 175 aaKnown RBP9.38□□□□□ -0.91
PKP4-206ENST00000452162 ANXA3P12429 323 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 ZNF20P17024 532 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 FAUP35544 74 aaKnown RBP9.38□□□□□ -0.91
PKP4-206ENST00000452162 TDGF1P3P51864 188 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 ZP1P60852 638 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 PMPCAQ10713 525 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 MOGAT2Q3SYC2 334 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 WIPI1Q5MNZ9 446 aaPredicted RBP9.38□□□□□ -0.91
PKP4-206ENST00000452162 ABLIM2Q6H8Q1 611 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 LAMTOR1Q6IAA8 161 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 FAM57BQ71RH2 274 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 ABHD12BQ7Z5M8 362 aaPredicted RBP9.38□□□□□ -0.91
PKP4-206ENST00000452162 OR5AS1Q8N127 324 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 ZNF283Q8N7M2 679 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 GJC3Q8NFK1 279 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 OR4D10Q8NGI6 311 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 OR13C9Q8NGT0 318 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 SEH1LQ96EE3 360 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 SFXN2Q96NB2 322 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 TTTY12Q9BZ98 90 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 ULBP2Q9BZM5 246 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 SLA2Q9H6Q3 261 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 SCPEP1Q9HB40 452 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 RAB22AQ9UL26 194 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 FLVCR1Q9Y5Y0 555 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 DIDO1Q9BTC0 2240 aaKnown RBP9.38□□□□□ -0.91
PKP4-206ENST00000452162 MYO7BQ6PIF6 2116 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 PCNX1Q96RV3 2341 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 MEIS3P1A6NDR6 274 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 FAM166BA8MTA8 275 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 E9PLN8 166 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 BPNT1O95861 308 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 LPLP06858 475 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 ABOP16442 354 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 GUCA1AP43080 201 aaPredicted RBP9.38□□□□□ -0.91
PKP4-206ENST00000452162 RAD52P43351 418 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 CLDN15P56746 228 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 CARD18P57730 90 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 UNC119Q13432 240 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 METTL11BQ5VVY1 283 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 TMEM53Q6P2H8 277 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 GLDNQ6ZMI3 551 aaPredicted RBP9.38□□□□□ -0.91
PKP4-206ENST00000452162 Q6ZTK2 550 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 DOK3Q7L591 496 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 ZNF627Q7L945 461 aa9.38□□□□□ -0.91
PKP4-206ENST00000452162 PAQR4Q8N4S7 273 aaPredicted RBP9.38□□□□□ -0.91
PKP4-206ENST00000452162 OR2V1Q8NHB1 315 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms