RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CLN6Q9NWW5 311 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 IFNKQ9P0W0 207 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZNRD1Q9P1U0 126 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 LGALS13Q9UHV8 139 aa2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 BRD4O60885 1362 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZNF816-ZNF321PA0A0X1KG74 233 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 MGAT4DA6NG13 374 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 TVP23AA6NH52 213 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 NCBP2LA6PVI3 153 aaKnown RBP2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 F6UB75 175 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 GOLGA8RI6L899 631 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 M0QXV9 152 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 CDC7O00311 574 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 ERI3O43414 337 aaKnown RBP2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 HSBP1O75506 76 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 RP2O75695 350 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 CCNKO75909 580 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 ERLIN2O94905 339 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 GABARAPO95166 117 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 KLHL2O95198 593 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 RCBTB2O95199 551 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 PLEKHA8P1O95397 391 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 LCA5LO95447 670 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 HBE1P02100 147 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 CATP04040 527 aaKnown RBP2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 FABP3P05413 133 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 BCHEP06276 602 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 S100A6P06703 90 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 AK4P27144 223 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 FOXN2P32314 431 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 CDKN2BP42772 138 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 CRATP43155 626 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 SP4Q02446 784 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 PIGHQ14442 188 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 SF3A2Q15428 464 aaKnown RBP2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZBTB6Q15916 424 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 PGGHGQ32M88 737 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 TRMT10CQ7L0Y3 403 aaKnown RBP2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 BHLHA15Q7RTS1 189 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 OR2W3Q7Z3T1 314 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 TMEM25Q86YD3 366 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZNF565Q8N9K5 539 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZNF514Q96K75 400 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 ALS2CR12Q96Q35 445 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 UTP23Q9BRU9 249 aaKnown RBP2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 BEX2Q9BXY8 128 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 ANGPTL4Q9BY76 406 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 POTEKPQ9BYX7 375 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 WDR55Q9H6Y2 383 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 UBE2ZQ9H832 354 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 RMND1Q9NWS8 449 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 SHANK1Q9Y566 2161 aa2.19□□□□□ -2.06
HMGB1P49-201ENST00000418882 A0A0A6YYD5 115 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 TRAV40A0A0B4J280 105 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 TSPAN11A1L157 253 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 CENPXA8MT69 81 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 RNASEK-C17orf49H0YIS7 233 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 H3BN98 237 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 MKRN2OSH3BPM6 223 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 MPDU1O75352 247 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 ADAP1O75689 374 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZMPSTE24O75844 475 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 AQP8O94778 261 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 RPN2P04844 631 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 SYT1P21579 422 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 BGNP21810 368 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 SERPINB5P36952 375 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 GPX4P36969 197 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 P2RY2P41231 377 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 MAGEA6P43360 314 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 HCAR3P49019 387 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 RND2P52198 227 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 ZNF138P52744 262 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 UBE2IP63279 158 aaKnown RBP2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 SLC39A6Q13433 755 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 MAD2L1BPQ15013 274 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 PRSS8Q16651 343 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 C5orf64Q2M2E5 130 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 TPRG1LQ5T0D9 272 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 TMPRSS11AQ6ZMR5 421 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 BOD1L2Q8IYS8 172 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 LGI3Q8N145 548 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 C17orf78Q8N4C9 275 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 OR4S2Q8NH73 311 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 ITFG1Q8TB96 612 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 LGALS14Q8TCE9 139 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 CXorf40AQ8TE69 158 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 GTF2H4Q92759 462 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 TNFRSF14Q92956 283 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 ITFG2Q969R8 447 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 SERPINB12Q96P63 405 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 NAPGQ99747 312 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 PAIP2Q9BPZ3 127 aaKnown RBP2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 PARD6GQ9BYG4 376 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 NDEL1Q9GZM8 345 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 WFDC1Q9HC57 220 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 CYB5R1Q9UHQ9 305 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 ST3GAL6Q9Y274 331 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 V9GYY9 64 aa2.18□□□□□ -2.06
HMGB1P49-201ENST00000418882 COL22A1Q8NFW1 1626 aaPredicted RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms