RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 RBP7Q96R05 134 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 TTYH2Q9BSA4 534 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 TMED9Q9BVK6 235 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 HES7Q9BYE0 225 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 TTTY12Q9BZ98 90 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 PRRG4Q9BZD6 226 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR51E2Q9H255 320 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 KCNN2Q9H2S1 579 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 WDR76Q9H967 626 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 PROK2Q9HC23 129 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 TIGARQ9NQ88 270 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 DEPPQ9NTK1 212 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 MED29Q9NX70 200 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 TAS2R5Q9NYW4 299 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 CCDC59Q9P031 241 aaKnown RBP3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 KLK13Q9UKR3 277 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 TRAPPC4Q9Y296 219 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 LSM2Q9Y333 95 aaKnown RBP3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 TMEM14AQ9Y6G1 99 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 DOCK10Q96BY6 2186 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 IGLV1-36A0A0B4J1U3 117 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 A0A0J9YW62 118 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 TRBV2A0A0J9YWF9 115 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 A0A1W2PQL4 384 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 CENPBD1B2RD01 187 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 C16orf97H3BN30 126 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 WNT9BO14905 357 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 CASKO14936 926 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 TFECO14948 347 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 TRAF3IP2O43734 574 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 EFNA2O43921 213 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 CXCL13O43927 109 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 TMCC2O75069 709 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 GPX5O75715 221 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 CLPXO76031 633 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 RPP14O95059 124 aaKnown RBP3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 VAMP5O95183 116 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 SERPINA3P01011 423 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 CGAP01215 116 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 TFP02787 698 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 HLA-DPB1P04440 258 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 HPNP05981 417 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 PGA4P0DJD7 388 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 PGA3P0DJD8 388 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR8G3PP0DMU2 310 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 HLA-DOBP13765 273 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 CTLA4P16410 223 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 CHATP28329 748 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 S100A5P33763 92 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 UGT2B10P36537 528 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 TGFBR1P36897 503 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 GUCA1AP43080 201 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 MAGEA5P43359 124 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 CSNK1A1P48729 337 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 GDI2P50395 445 aaKnown RBP3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 RIDAP52758 137 aaKnown RBP3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 CLDN20P56880 219 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR12D2P58182 307 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 RPS25P62851 125 aaKnown RBP3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 PPIAP62937 165 aaKnown RBP3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 MXD1Q05195 221 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 RUNX1T1Q06455 604 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 FMODQ06828 376 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC3A1Q07837 685 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 ACSM1Q08AH1 577 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 CAMK2DQ13557 499 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 TPBGQ13641 420 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 CDK5R1Q15078 307 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF239Q16600 458 aaKnown RBP3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 MS4A18Q3C1V0 323 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 CDONQ4KMG0 1287 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 LINC01590Q5TEZ4 76 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 SERTAD4-AS1Q5TG53 156 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 C22orf42Q6IC83 251 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 FAM122CQ6P4D5 195 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 KCTD18Q6PI47 426 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC22A25Q6T423 547 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 SSX6Q7RTT6 188 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 DPY19L4Q7Z388 723 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 KRT77Q7Z794 578 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 NOXA1Q86UR1 476 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 CDC20BQ86Y33 519 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 MCEMP1Q8IX19 187 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 PHC2Q8IXK0 858 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 ODF3L1Q8IXM7 274 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR6V1Q8N148 313 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 GPR137CQ8N3F9 429 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 TMEM251Q8N6I4 163 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 SCCPDHQ8NBX0 429 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 MDS2Q8NDY4 140 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 FDCSPQ8NFU4 85 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR9K2Q8NGE7 335 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR2AJ1Q8NGZ0 328 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR52N5Q8NH56 324 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR10D3Q8NH80 312 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 MCFD2Q8NI22 146 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 SMAP2Q8WU79 429 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 S100ZQ8WXG8 99 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 ASB17Q8WXJ9 295 aa3.3□□□□□ -1.88
HMGB3P20-201ENST00000417997 TMEM203Q969S6 136 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms