RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 TSACCQ96A04 125 aaPredicted RBP3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 TAMM41Q96BW9 452 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 FLYWCH2Q96CP2 140 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 CCDC126Q96EE4 140 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 ZHX1-C8orf76Q96EF9 292 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 MS4A14Q96JA4 679 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 POM121L2Q96KW2 1035 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 EPYCQ99645 322 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 C19orf24Q9BVV8 132 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 TMEM27Q9HBJ8 222 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 POPDC2Q9HBU9 364 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 TMBIM4Q9HC24 238 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 GALNT9Q9HCQ5 603 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 TMEM138Q9NPI0 162 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 KLRF1Q9NZS2 232 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 B4GALT7Q9UBV7 327 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 KCNG2Q9UJ96 466 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 GOLT1BQ9Y3E0 138 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 LOXL2Q9Y4K0 774 aa3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 TDRD15B5MCY1 1934 aaKnown RBP3.03□□□□□ -1.92
ECHDC1-205ENST00000368295 TENM1Q9UKZ4 2725 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 MYOFQ9NZM1 2061 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 IGKV6D-21A0A0A0MT36 114 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 A0A0A6YYD5 115 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 KIR2DL5BA0A0G2JN68 375 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 KIR2DL5BA0A0G2JPC4 375 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 ASPDHA6ND91 283 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 E5RGE8 158 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 NEDD8-MDP1E9PL57 170 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 LMO7DNF2Z398 122 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 CXCR6O00574 342 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 PFDN6O15212 129 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 SLC16A7O60669 478 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 IFNA10P01566 189 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 OR8U9P0C7N5 309 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 NTSP30990 170 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 SFTPDP35247 375 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 GPX4P36969 197 aaPredicted RBP3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 MAGEA5P43359 124 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 RPL5P46777 297 aaKnown RBP3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 GNPDA1P46926 289 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 NOVP48745 357 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 SGSHP51688 502 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 RPS15AP62244 130 aaKnown RBP3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 SLC35B1P78383 322 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 DGCR2P98153 550 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 MS4A2Q01362 244 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 OC90Q02509 493 aaPredicted RBP3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 ACVR1Q04771 509 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 BAMBIQ13145 260 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 GPR17Q13304 367 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 CTTNQ14247 550 aaKnown RBP3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 IRF4Q15306 451 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 SPIN4Q56A73 249 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 ZNF542PQ5EBM4 170 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 TEDDM1Q5T9Z0 273 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 FRG2Q64ET8 278 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 ZNF774Q6NX45 483 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 LEG1Q6P5S2 330 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 MYO7BQ6PIF6 2116 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 CYB5R4Q7L1T6 521 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 GDPD3Q7L5L3 318 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 C17orf64Q86WR6 236 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 SFTPA2Q8IWL1 248 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 SLC35F2Q8IXU6 374 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 KIR2DL5AQ8N109 375 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 OR6V1Q8N148 313 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 CPSF7Q8N684 471 aaKnown RBP3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 LRRC52Q8N7C0 313 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 NANOGP1Q8N7R0 232 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 KIR2DL5BQ8NHK3 375 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 RDH11Q8TC12 318 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 TFB1MQ8WVM0 346 aaKnown RBP3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 RERGQ96A58 199 aaPredicted RBP3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 BPIFA2Q96DR5 249 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 SMIM19Q96E16 107 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 MRPL48Q96GC5 212 aaKnown RBP3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 TMEM56Q96MV1 263 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 PPP1R2P1Q96PQ5 205 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 PRR25Q96S07 402 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 ATP5SQ99766 215 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 NEURL2Q9BR09 285 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 ZNF747Q9BV97 191 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 ALOXE3Q9BYJ1 711 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 PPA2Q9H2U2 334 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 TMEM38AQ9H6F2 299 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 FBXO6Q9NRD1 293 aaPredicted RBP3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 FGF21Q9NSA1 209 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 NPAP1Q9NZP6 1156 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 BFARQ9NZS9 450 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 B3GAT1Q9P2W7 334 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 GHRLQ9UBU3 117 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 FBXO5Q9UKT4 447 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 HHLA2Q9UM44 414 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 UBQLN1Q9UMX0 589 aaKnown RBP3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 NSG2Q9Y328 171 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 HS3ST3A1Q9Y663 406 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 TMEM56-RWDD3S4R434 201 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 TENM3Q9P273 2699 aa3.02□□□□□ -1.93
ECHDC1-205ENST00000368295 GLYATL1P3A0A0U1RQE8 302 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms