RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 MMP16P51512 607 aa17.57■□□□□ 0.4
CRLF3-201ENST00000324238 LPCAT3Q6P1A2 487 aa17.57■□□□□ 0.4
CRLF3-201ENST00000324238 AKIRIN1Q9H9L7 192 aaPredicted RBP17.57■□□□□ 0.4
CRLF3-201ENST00000324238 ELL3Q9HB65 397 aaPredicted RBP17.57■□□□□ 0.4
CRLF3-201ENST00000324238 MLXQ9UH92 298 aa17.57■□□□□ 0.4
CRLF3-201ENST00000324238 MTCH2Q9Y6C9 303 aa17.57■□□□□ 0.4
CRLF3-201ENST00000324238 CPAMD8Q8IZJ3 1885 aa17.57■□□□□ 0.4
CRLF3-201ENST00000324238 DUS4LO95620 317 aaKnown RBP17.57■□□□□ 0.4
CRLF3-201ENST00000324238 SFTPBP07988 381 aa17.57■□□□□ 0.4
CRLF3-201ENST00000324238 ZNF121P58317 390 aaPredicted RBP17.57■□□□□ 0.4
CRLF3-201ENST00000324238 DCAF7P61962 342 aa17.57■□□□□ 0.4
CRLF3-201ENST00000324238 H3F3CQ6NXT2 135 aa17.57■□□□□ 0.4
CRLF3-201ENST00000324238 DTX1Q86Y01 620 aa17.57■□□□□ 0.4
CRLF3-201ENST00000324238 OR8B12Q8NGG6 310 aa17.57■□□□□ 0.4
CRLF3-201ENST00000324238 PIGMQ9H3S5 423 aa17.57■□□□□ 0.4
CRLF3-201ENST00000324238 CHST11Q9NPF2 352 aa17.57■□□□□ 0.4
CRLF3-201ENST00000324238 CYB5R1Q9UHQ9 305 aa17.57■□□□□ 0.4
CRLF3-201ENST00000324238 PURGQ9UJV8 347 aaKnown RBP17.57■□□□□ 0.4
CRLF3-201ENST00000324238 GLI4P10075 376 aa17.56■□□□□ 0.4
CRLF3-201ENST00000324238 MYBPHQ13203 477 aa17.56■□□□□ 0.4
CRLF3-201ENST00000324238 PABPC1L2AQ5JQF8 200 aa17.56■□□□□ 0.4
CRLF3-201ENST00000324238 TERB2Q8NHR7 220 aa17.56■□□□□ 0.4
CRLF3-201ENST00000324238 MYOZ1Q9NP98 299 aaPredicted RBP17.56■□□□□ 0.4
CRLF3-201ENST00000324238 PIAS2O75928 621 aa17.56■□□□□ 0.4
CRLF3-201ENST00000324238 STK11Q15831 433 aa17.56■□□□□ 0.4
CRLF3-201ENST00000324238 DNM1P34Q6PK57 102 aa17.56■□□□□ 0.4
CRLF3-201ENST00000324238 ETV3LQ6ZN32 361 aa17.56■□□□□ 0.4
CRLF3-201ENST00000324238 BAP18Q8IXM2 172 aa17.56■□□□□ 0.4
CRLF3-201ENST00000324238 SMIM3Q9BZL3 60 aa17.56■□□□□ 0.4
CRLF3-201ENST00000324238 CYTL1Q9NRR1 136 aa17.56■□□□□ 0.4
CRLF3-201ENST00000324238 FBXO24O75426 580 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 IGLV3-19P01714 112 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 DAP3P51398 398 aaKnown RBP17.55■□□□□ 0.4
CRLF3-201ENST00000324238 CLRN1P58418 232 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 RAB32Q13637 225 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 LINC00518Q8N0U6 118 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 OR5AS1Q8N127 324 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 ZNF775Q96BV0 537 aaPredicted RBP17.55■□□□□ 0.4
CRLF3-201ENST00000324238 SLC2A8Q9NY64 477 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 B3GAT1Q9P2W7 334 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 H7C2Y5 167 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 NUDT21O43809 227 aaKnown RBP17.55■□□□□ 0.4
CRLF3-201ENST00000324238 SERPINA5P05154 406 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 RAB6AP20340 208 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 PGAP1Q75T13 922 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 HOGA1Q86XE5 327 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 ZNF441Q8N8Z8 693 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 ZDHHC22Q8N966 263 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 TMEM234Q8WY98 164 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 RPH3AQ9Y2J0 694 aaPredicted RBP17.55■□□□□ 0.4
CRLF3-201ENST00000324238 A6NIZ1 184 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 CD37P11049 281 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 NME2P22392 152 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 RAP1BP61224 184 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 RAP1AP62834 184 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 SRSF4Q08170 494 aaKnown RBP17.55■□□□□ 0.4
CRLF3-201ENST00000324238 NUBPLQ8TB37 319 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 OR5B2Q96R09 309 aa17.55■□□□□ 0.4
CRLF3-201ENST00000324238 ZNF629Q9UEG4 869 aaPredicted RBP17.55■□□□□ 0.4
CRLF3-201ENST00000324238 TO15178 435 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 SIGLEC6O43699 453 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 BPNT1O95861 308 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 IGHMP01871 453 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 ZNF17P17021 662 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 SUPT4H1P63272 117 aaKnown RBP17.54■□□□□ 0.4
CRLF3-201ENST00000324238 SCRN3Q0VDG4 424 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 RBM39Q14498 530 aaKnown RBP17.54■□□□□ 0.4
CRLF3-201ENST00000324238 PHF19Q5T6S3 580 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 PLXDC1Q8IUK5 500 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 TMEM59Q9BXS4 323 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 A0A0A6YYH2 397 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 A0A1B0GX78 115 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 A6NJ64 397 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 TMEM14DPA8MWL7 114 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 DUX1O43812 170 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 CDC14BO60729 498 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 AMY2BP19961 511 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 APCDD1LQ8NCL9 501 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 KLHL13Q9P2N7 655 aa17.54■□□□□ 0.4
CRLF3-201ENST00000324238 ZDBF2Q9HCK1 2354 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 LIPT2A6NK58 231 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 VSTM2BA6NLU5 285 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 WDPCPO95876 746 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 TPT1P13693 172 aaKnown RBP17.53■□□□□ 0.4
CRLF3-201ENST00000324238 PVALBP20472 110 aaPredicted RBP17.53■□□□□ 0.4
CRLF3-201ENST00000324238 LAP3P28838 519 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 ZNF283Q8N7M2 679 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 OR10G3Q8NGC4 313 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 OR2AJ1Q8NGZ0 328 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 OR13G1Q8NGZ3 307 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 C1orf147Q96MC9 270 aaPredicted RBP17.53■□□□□ 0.4
CRLF3-201ENST00000324238 HDHD3Q9BSH5 251 aaPredicted RBP17.53■□□□□ 0.4
CRLF3-201ENST00000324238 TRBV11-1A0A0K0K1C0 115 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 F5H5K5 113 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 SERPINA2P20848 420 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 NXPH1P58417 271 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 PCK2Q16822 640 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 RPL7L1Q6DKI1 246 aaKnown RBP17.53■□□□□ 0.4
CRLF3-201ENST00000324238 LCN10Q6JVE6 187 aa17.53■□□□□ 0.4
CRLF3-201ENST00000324238 OR51T1Q8NGJ9 327 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms