RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 TSC22D1Q15714 1073 aa16■□□□□ 0.15
USP39-201ENST00000323701 UBE2V2Q15819 145 aa16■□□□□ 0.15
USP39-201ENST00000323701 RTL6Q6ICC9 239 aa16■□□□□ 0.15
USP39-201ENST00000323701 Q8NA96 180 aa16■□□□□ 0.15
USP39-201ENST00000323701 S100A16Q96FQ6 103 aaKnown RBP16■□□□□ 0.15
USP39-201ENST00000323701 A0A1W2PR80 420 aa16■□□□□ 0.15
USP39-201ENST00000323701 LDLRAD4O15165 306 aa16■□□□□ 0.15
USP39-201ENST00000323701 CCNOP22674 350 aa16■□□□□ 0.15
USP39-201ENST00000323701 IGHV1-2P23083 117 aa16■□□□□ 0.15
USP39-201ENST00000323701 MMP15P51511 669 aa16■□□□□ 0.15
USP39-201ENST00000323701 ZNF92Q03936 586 aa16■□□□□ 0.15
USP39-201ENST00000323701 C3P1Q6ZMU1 363 aa16■□□□□ 0.15
USP39-201ENST00000323701 NKAIN3Q8N8D7 197 aa16■□□□□ 0.15
USP39-201ENST00000323701 C19orf18Q8NEA5 215 aa16■□□□□ 0.15
USP39-201ENST00000323701 WNT2BQ93097 391 aa16■□□□□ 0.15
USP39-201ENST00000323701 RFT1Q96AA3 541 aa16■□□□□ 0.15
USP39-201ENST00000323701 CIB4A0PJX0 185 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 MEIOCA2RUB1 952 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 TOXO94900 526 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 NR4A2P43354 598 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 NKX2-5P52952 324 aaPredicted RBP15.99■□□□□ 0.15
USP39-201ENST00000323701 TMEM69Q5SWH9 247 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 RPUSD3Q6P087 351 aaKnown RBP15.99■□□□□ 0.15
USP39-201ENST00000323701 ANKRD16Q6P6B7 361 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 PAQR4Q8N4S7 273 aaPredicted RBP15.99■□□□□ 0.15
USP39-201ENST00000323701 SSC4DQ8WTU2 575 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 RAB40AQ8WXH6 277 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 GPR137Q96N19 417 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 MMP28Q9H239 520 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 METTL17Q9H7H0 456 aaPredicted RBP15.99■□□□□ 0.15
USP39-201ENST00000323701 GLRX2Q9NS18 164 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 C5orf49A4QMS7 147 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 OR14I1A6ND48 311 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 LYZL6O75951 148 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 KIR2DL3P43628 341 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 ZNF57Q68EA5 555 aaPredicted RBP15.99■□□□□ 0.15
USP39-201ENST00000323701 MYPOPQ86VE0 399 aaPredicted RBP15.99■□□□□ 0.15
USP39-201ENST00000323701 SORCS2Q96PQ0 1159 aa15.99■□□□□ 0.15
USP39-201ENST00000323701 AHRRA9YTQ3 701 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 RAD51DO75771 328 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 FAM87AP0C7U9 286 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 STOMP27105 288 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 ZNF93P35789 620 aaPredicted RBP15.98■□□□□ 0.15
USP39-201ENST00000323701 OR3A4PP47883 348 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 SCAND1P57086 179 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 TAS2R20P59543 309 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 UNC119Q13432 240 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 TBRG1Q3YBR2 411 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 NSUN5P2Q63ZY6 315 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 OR52I2Q8NH67 350 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 CHAC2Q8WUX2 184 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 ZNF75AQ96N20 296 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 C1QTNF5Q9BXJ0 243 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 FAM215AQ9Y5M1 114 aa15.98■□□□□ 0.15
USP39-201ENST00000323701 RRP8O43159 456 aaKnown RBP15.97■□□□□ 0.15
USP39-201ENST00000323701 TNFSF13O75888 250 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 FAM157BP0CG42 384 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 QRFPP83859 136 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 MOGAT2Q3SYC2 334 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 COLCA1Q6ZS62 124 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 PGAP1Q75T13 922 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 NAXEQ8NCW5 288 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 SMIM4Q8WVI0 70 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 FAM46BQ96A09 425 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 CYYR1Q96J86 154 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 C1orf147Q96MC9 270 aaPredicted RBP15.97■□□□□ 0.15
USP39-201ENST00000323701 KLK11Q9UBX7 282 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 ATRXP46100 2492 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 LYRM1O43325 122 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 NGFP01138 241 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 FAM3AP98173 230 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 AGAP6Q5VW22 663 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 ZNF324BQ6AW86 544 aaPredicted RBP15.97■□□□□ 0.15
USP39-201ENST00000323701 MDP1Q86V88 176 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 OR5D18Q8NGL1 313 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 POM121L2Q96KW2 1035 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 CHST5Q9GZS9 411 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 MRPL15Q9P015 296 aaKnown RBP15.97■□□□□ 0.15
USP39-201ENST00000323701 RELNP78509 3460 aa15.97■□□□□ 0.15
USP39-201ENST00000323701 ITPR1Q14643 2758 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 WIPF3A6NGB9 483 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 GGT3PA6NGU5 568 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 XRCC3O43542 346 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 ORC5O43913 435 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 TPOP07202 933 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 HCKP08631 526 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 VSIG8P0DPA2 414 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 GPR176Q14439 515 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 KRT74Q7RTS7 529 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 C1QL2Q7Z5L3 287 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 RTN4RL2Q86UN3 420 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 ANGPTL5Q86XS5 388 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 CISD2Q8N5K1 135 aaKnown RBP15.96■□□□□ 0.15
USP39-201ENST00000323701 C17orf50Q8WW18 174 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 FOXRED1Q96CU9 486 aaPredicted RBP15.96■□□□□ 0.15
USP39-201ENST00000323701 SLC22A4Q9H015 551 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 ATG5Q9H1Y0 275 aa15.96■□□□□ 0.15
USP39-201ENST00000323701 ELF5Q9UKW6 265 aaPredicted RBP15.96■□□□□ 0.15
USP39-201ENST00000323701 RBMX2Q9Y388 322 aaKnown RBP15.96■□□□□ 0.15
USP39-201ENST00000323701 hCG_38984A0A1B0GV85 526 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms