RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SLC25A1P53007 311 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 ELLP55199 621 aaPredicted RBP5.94□□□□□ -1.46
ZNF540-201ENST00000316433 UCP2P55851 309 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 PPP2CBP62714 309 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 PPP2CAP67775 309 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 MC1RQ01726 317 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 CDK5R1Q15078 307 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 FBLN7Q53RD9 439 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 SOHLH1Q5JUK2 328 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 Q6ZVU0 165 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 LRP11Q86VZ4 500 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF547Q8IVP9 402 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 RAB42Q8N4Z0 105 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 SIRT6Q8N6T7 355 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 ZSCAN4Q8NAM6 433 aaPredicted RBP5.94□□□□□ -1.46
ZNF540-201ENST00000316433 SYNPRQ8TBG9 265 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 IRF7Q92985 503 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 PTX4Q96A99 478 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 ZBTB8AQ96BR9 441 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 GNRHR2Q96P88 292 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 MYADMQ96S97 322 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 GINS3Q9BRX5 216 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 PLA2G12AQ9BZM1 189 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 GLIPR2Q9H4G4 154 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 CNTD2Q9H8S5 307 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 TAF9BQ9HBM6 251 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 NAGKQ9UJ70 344 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 HEBP2Q9Y5Z4 205 aa5.94□□□□□ -1.46
ZNF540-201ENST00000316433 EDDM13A0A1B0GTR0 161 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 A0A1W2PPK0 400 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 OR2AG2A6NM03 316 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ARPC3O15145 178 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 FCMRO60667 390 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF354AO60765 605 aaPredicted RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 CTSVO60911 334 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ARL6IP5O75915 188 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 GLRA1P23415 457 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 FPR2P25090 351 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 DPP4P27487 766 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 MC5RP33032 325 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 COMPP49747 757 aaPredicted RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF136P52737 540 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 PMS2P11Q13670 270 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 GPR18Q14330 331 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 SLC22A6Q4U2R8 563 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ALG10BQ5I7T1 473 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF615Q8N8J6 731 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 OR2M7Q8NG81 312 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 MITD1Q8WV92 249 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 GPA33Q99795 319 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 HIPK2Q9H2X6 1198 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 OR51I1Q9H343 314 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 CHD3Q12873 2000 aaKnown RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 H7BY64 318 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 HLA-AP01891 365 aaKnown RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 GBAP04062 536 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 GTF2F2P13984 249 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 TUBG1P23258 451 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ACVR1BP36896 505 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 CLDN18P56856 261 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 SELENOVP59797 346 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 RANP62826 216 aaKnown RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 RPS26P62854 115 aaKnown RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 CSNK1G2P78368 415 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ID2Q02363 134 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 TGM3Q08188 693 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ASTLQ6HA08 431 aaPredicted RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 RPL22L1Q6P5R6 122 aaKnown RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 BHLHA15Q7RTS1 189 aaPredicted RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 TMEM173Q86WV6 379 aaPredicted RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 STPG4Q8N801 248 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 SUMF2Q8NBJ7 301 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF738Q8NE65 137 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 OR6T1Q8NGN1 323 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 HAVCR1Q96D42 359 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 VWCEQ96DN2 955 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 SMIM19Q96E16 107 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 EGLN3Q9H6Z9 239 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 TUBG2Q9NRH3 451 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 SLC2A9Q9NRM0 540 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ZNF701Q9NV72 531 aaPredicted RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 STEAP1Q9UHE8 339 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 SH2B3Q9UQQ2 575 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 COLQQ9Y215 455 aaPredicted RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 CPAMD8Q8IZJ3 1885 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 TRBV5-5A0A0J9YX44 114 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 MSGN1A6NI15 193 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 EEF1E1-BLOC1S5C9J1V9 151 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 K7ERU9 68 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 XKRYO14609 159 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 TNFSF13O75888 250 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 DBIP07108 87 aaKnown RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 ACRP10323 421 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 RPL4P36578 427 aaKnown RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 OR3A2P47893 321 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 GLIPR1P48060 266 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 CCL23P55773 120 aa5.93□□□□□ -1.46
ZNF540-201ENST00000316433 RPS4XP62701 263 aaKnown RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 PRDX1Q06830 199 aaKnown RBP5.93□□□□□ -1.46
ZNF540-201ENST00000316433 FHL1Q13642 323 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms