RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 DOK3Q7L591 496 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 TMEM123Q8N131 208 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 OR14K1Q8NGZ2 314 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 PIGTQ969N2 578 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 FBXO17Q96EF6 278 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 SLC25A21Q9BQT8 299 aaPredicted RBP16.39■□□□□ 0.21
RNF139-201ENST00000303545 CST11Q9H112 138 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 LOXL2Q9Y4K0 774 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 LINC00862A6NCI5 91 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 CBR3O75828 277 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 ERCC1P07992 297 aaPredicted RBP16.39■□□□□ 0.21
RNF139-201ENST00000303545 GRB2P62993 217 aaKnown RBP16.39■□□□□ 0.21
RNF139-201ENST00000303545 DHODHQ02127 395 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 PPP1R1AQ13522 171 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 ZNF239Q16600 458 aaKnown RBP16.39■□□□□ 0.21
RNF139-201ENST00000303545 WIPI1Q5MNZ9 446 aaPredicted RBP16.39■□□□□ 0.21
RNF139-201ENST00000303545 RFPL4BQ6ZWI9 263 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 ESX1Q8N693 406 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 OR2AE1Q8NHA4 323 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 TMEM54Q969K7 222 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 ELL3Q9HB65 397 aaPredicted RBP16.39■□□□□ 0.21
RNF139-201ENST00000303545 TCFL5Q9UL49 500 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 KIAA1549Q9HCM3 1950 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 DOCK10Q96BY6 2186 aa16.39■□□□□ 0.21
RNF139-201ENST00000303545 I3L521 148 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 ZNHIT1O43257 154 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 P04436 131 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 ZNF250P15622 560 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 DCAF12Q5T6F0 453 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 SLC23A3Q6PIS1 610 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 NAXEQ8NCW5 288 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 GJC3Q8NFK1 279 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 COQ8AQ8NI60 647 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 CT55Q8WUE5 264 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 ST8SIA4Q92187 359 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 ARHGAP5-AS1Q96IT6 56 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 NAA11Q9BSU3 229 aaPredicted RBP16.38■□□□□ 0.21
RNF139-201ENST00000303545 TMEM59Q9BXS4 323 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 ARRDC1-AS1Q9H2J1 176 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 PADI1Q9ULC6 663 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 PCSK5Q92824 1860 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 LOC102725191A0A1B0GVB3 256 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 EIF1BO60739 113 aaKnown RBP16.38■□□□□ 0.21
RNF139-201ENST00000303545 VAMP1P23763 118 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 CD34P28906 385 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 S100A11P31949 105 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 TMEM50BP56557 158 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 RAB14P61106 215 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 CSNK2A1P68400 391 aaPredicted RBP16.38■□□□□ 0.21
RNF139-201ENST00000303545 ATXN7L3Q14CW9 347 aaPredicted RBP16.38■□□□□ 0.21
RNF139-201ENST00000303545 SNAI3Q3KNW1 292 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 RAB3CQ96E17 227 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 ALKBH3Q96Q83 286 aaPredicted RBP16.38■□□□□ 0.21
RNF139-201ENST00000303545 PIGQQ9BRB3 760 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 KCNN3Q9UGI6 736 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 PLEKHA6Q9Y2H5 1048 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 BDP1A6H8Y1 2624 aa16.38■□□□□ 0.21
RNF139-201ENST00000303545 STMND1H3BQB6 276 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 H3BUI4 141 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 CXCL13O43927 109 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 SCO1O75880 301 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 CYC1P08574 325 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 SERPINA2P20848 420 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 AVPR2P30518 371 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 CASRP41180 1078 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 SUCLG1P53597 346 aaKnown RBP16.37■□□□□ 0.21
RNF139-201ENST00000303545 RAC1P63000 192 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 UBE2V2Q15819 145 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 PGAP1Q75T13 922 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 KCTD9Q7L273 389 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 FN3KRPQ9HA64 309 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 DEPPQ9NTK1 212 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 PIGLQ9Y2B2 252 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 PLATP00750 562 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 BEX5Q5H9J7 111 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 OR4K15Q8NH41 348 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 MARCH1Q8TCQ1 289 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 ZC3H10Q96K80 434 aaKnown RBP16.37■□□□□ 0.21
RNF139-201ENST00000303545 PDCD10Q9BUL8 212 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 CRLF2Q9HC73 371 aa16.37■□□□□ 0.21
RNF139-201ENST00000303545 CCDC187A0A096LP49 1063 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 TRAV14DV4A0A0A6YYC5 116 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 PINLYPA6NC86 204 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 IFNA6P05013 189 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 FCGR2AP12318 317 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 PI3P19957 117 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 FKBP2P26885 142 aaKnown RBP16.36■□□□□ 0.21
RNF139-201ENST00000303545 B3GALT5-AS1P59052 145 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 LSM6P62312 80 aaKnown RBP16.36■□□□□ 0.21
RNF139-201ENST00000303545 MEF2DQ14814 521 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 KISS1Q15726 138 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 CLLU1Q5K131 121 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 OR51T1Q8NGJ9 327 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 EDEM2Q9BV94 578 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 ALX4Q9H161 411 aaPredicted RBP16.36■□□□□ 0.21
RNF139-201ENST00000303545 PRR13Q9NZ81 148 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 ASPMQ8IZT6 3477 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 M0R135 149 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 KCNAB3O43448 404 aa16.36■□□□□ 0.21
RNF139-201ENST00000303545 IGHV3-9P01782 118 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms