RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 SLC2A4RGQ9NR83 387 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 OR14J1Q9UGF5 321 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 RNF11Q9Y3C5 154 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ZBTB42B2RXF5 422 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 NME2P1O60361 137 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 IGHEP01854 428 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 SLC25A4P12235 298 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 GM2AP17900 193 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 BTG2P78543 158 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ACVR1Q04771 509 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 DLX2Q07687 328 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 OR10G6Q8NH81 332 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ARRDC2Q8TBH0 407 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 IL22RA2Q969J5 263 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ESAMQ96AP7 390 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 GABRG3Q99928 467 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 MAGT1Q9H0U3 335 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 RBKSQ9H477 322 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 FGF20Q9NP95 211 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 TCRBV21S2A2A0A5A6 115 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 A6NIN4 97 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 GSTZ1O43708 216 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 SSSCA1O60232 199 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 CA2P00918 260 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 HLA-GP17693 338 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 FUT4P22083 530 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 RPS4Y1P22090 263 aaKnown RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 FPR2P25090 351 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 TNFSF9P41273 254 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 GPR3P46089 330 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 HLA-DRB3P79483 266 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 AESQ08117 197 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 YOD1Q5VVQ6 348 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 CLEC18BQ6UXF7 455 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 OR5M1Q8NGP8 315 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ROBO4Q8WZ75 1007 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ISG20Q96AZ6 181 aaKnown RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 R3HDM4Q96D70 268 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 TNFP01375 233 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ATXN8OSP0DMR3 200 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 GABRA3P34903 492 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 CCR5P51681 352 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ALKBH1Q13686 389 aaKnown RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 S100A7L2Q5SY68 101 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ZFAND6Q6FIF0 208 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 LIPIQ6XZB0 460 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 WDR89Q96FK6 387 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-201ENST00000297405 MIXL1Q9H2W2 232 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 SLC25A19Q9HC21 320 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 HRASLSQ9HDD0 168 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 ACER3Q9NUN7 267 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 TMED7Q9Y3B3 224 aa4.42□□□□□ -1.7
CSMD3-201ENST00000297405 UTS2O95399 124 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 HOXA10P31260 410 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 LIPAP38571 399 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 KIR2DS3Q14952 304 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ACKR1Q16570 336 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PNKDQ8N490 385 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 CELF5Q8N6W0 485 aaKnown RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ARL14EPQ8N8R7 260 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 BOD1Q96IK1 185 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PRELID3AQ96N28 172 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 NOX4Q9NPH5 578 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PRSS16Q9NQE7 514 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 PRDM7Q9NQW5 492 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 OR6C3Q9NZP0 311 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 MFSD2BA6NFX1 497 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ANKRD61A6NGH8 418 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 TNFRSF10CO14798 259 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 RD3LP0DJH9 198 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ARSJQ5FYB0 599 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 BEX5Q5H9J7 111 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 OR10G8Q8NGN5 311 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 NDRG1Q92597 394 aaKnown RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 FUBP1Q96AE4 644 aaKnown RBP4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ARHGAP9Q9BRR9 750 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 IL36AQ9UHA7 158 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 M0R082 166 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 SLC25A17O43808 307 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 MYOGP15173 224 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 FUT2Q10981 343 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ANKRD55Q3KP44 614 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 RNFT1Q5M7Z0 435 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 MAMDC4Q6UXC1 1216 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 OR2V2Q96R30 315 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 C20orf24Q9BUV8 137 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 C1QTNF3Q9BXJ4 246 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 GPR62Q9BZJ7 368 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 HSPB7Q9UBY9 170 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 MTFP1Q9UDX5 166 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 KCND3Q9UK17 655 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 SNX11Q9Y5W9 270 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 LRP6O75581 1613 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 TBC1D3DA0A087WVF3 549 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 TBC1D3IA0A087WXS9 549 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 C7orf71A4D174 169 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 TBC1D3LB9A6J9 549 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 ANKRD63C9JTQ0 380 aa4.41□□□□□ -1.7
CSMD3-201ENST00000297405 CDIPTO14735 213 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms