RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 FKBP2P26885 142 aaKnown RBP10.33□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF83P51522 516 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 PPP1CAP62136 330 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 IQCJQ1A5X6 159 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 TBC1D26Q86UD7 250 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 IP6K3Q96PC2 410 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 OR4C12Q96R67 309 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 ST3GAL6Q9Y274 331 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 HCFC2Q9Y5Z7 792 aa10.33□□□□□ -0.76
PTPN4-201ENST00000263708 RGPD1P0DJD0 1748 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 PTGESO14684 152 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 T-ENOLP0DO92 83 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 RPL24P83731 157 aaKnown RBP10.32□□□□□ -0.76
PTPN4-201ENST00000263708 IHHQ14623 411 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 RPEL1Q2QD12 228 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 ARRDC2Q8TBH0 407 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 GPX8Q8TED1 209 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 SLX4Q8IY92 1834 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 SRSF9Q13242 221 aaKnown RBP eCLIP10.32□□□□□ -0.76
PTPN4-201ENST00000263708 TMEM81Q6P7N7 255 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 UBTD1Q9HAC8 227 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 CLEC2DQ9UHP7 191 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 CCL26Q9Y258 94 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 NUP188Q5SRE5 1749 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 SVILO95425 2214 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 H3BP45 60 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 FAM87AP0C7U9 286 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 SOWAHCQ53LP3 525 aaPredicted RBP10.32□□□□□ -0.76
PTPN4-201ENST00000263708 TMEM88Q6PEY1 159 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 RELL2Q8NC24 303 aaPredicted RBP10.32□□□□□ -0.76
PTPN4-201ENST00000263708 OR13H1Q8NG92 308 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 LOXL2Q9Y4K0 774 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 UBR2Q8IWV8 1755 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 ADIPOQQ15848 244 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 RNFT1Q5M7Z0 435 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 GLCCI1Q86VQ1 547 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 CALHM3Q86XJ0 350 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 CHAC2Q8WUX2 184 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 SLC35B4Q969S0 331 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 G6PCP35575 357 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 CLDN15P56746 228 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 SPCS3P61009 180 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 MOGAT2Q3SYC2 334 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 DMRTC1Q5HYR2 192 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 BCORP1Q8N888 145 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 CCL17Q92583 94 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 ARRDC1-AS1Q9H2J1 176 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 CACFD1Q9UGQ2 172 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 TO15178 435 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 CTNSO60931 367 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 ICOSLGO75144 302 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 LALBAP00709 142 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 OR3A4PP47883 348 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 XKR7Q5GH72 579 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 TIPARPQ7Z3E1 657 aaKnown RBP10.32□□□□□ -0.76
PTPN4-201ENST00000263708 CLDN23Q96B33 292 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 MRAP2Q96G30 205 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 SMIM14Q96QK8 99 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 SORT1Q99523 831 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 CXorf36Q9H7Y0 433 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 TMEM140Q9NV12 185 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 MYO7AQ13402 2215 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 SPRY1O43609 319 aaPredicted RBP10.32□□□□□ -0.76
PTPN4-201ENST00000263708 LGALS7P47929 136 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 SNRPNP63162 240 aaKnown RBP10.32□□□□□ -0.76
PTPN4-201ENST00000263708 NEURL3Q96EH8 262 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 MYOZ1Q9NP98 299 aaPredicted RBP10.32□□□□□ -0.76
PTPN4-201ENST00000263708 RALYQ9UKM9 306 aaKnown RBP10.32□□□□□ -0.76
PTPN4-201ENST00000263708 ELAVL1Q15717 326 aaKnown RBP10.32□□□□□ -0.76
PTPN4-201ENST00000263708 HDAC8Q9BY41 377 aa10.32□□□□□ -0.76
PTPN4-201ENST00000263708 SOCS7O14512 581 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 TEAD1P28347 426 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 CALCRP30988 508 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 ACAA2P42765 397 aaKnown RBP10.31□□□□□ -0.76
PTPN4-201ENST00000263708 DHODHQ02127 395 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 SLC36A1Q7Z2H8 476 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 DOLPP1Q86YN1 238 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF485Q8NCK3 441 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 TM4SF18Q96CE8 201 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 SIRT3Q9NTG7 399 aaPredicted RBP10.31□□□□□ -0.76
PTPN4-201ENST00000263708 ZNF346Q9UL40 294 aaKnown RBP10.31□□□□□ -0.76
PTPN4-201ENST00000263708 SCN1AP35498 2009 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 DICER1Q9UPY3 1922 aaKnown RBP10.31□□□□□ -0.76
PTPN4-201ENST00000263708 CCDC187A0A096LP49 1063 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 K7ESF4 209 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 ADPRHP54922 357 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 TAGLNQ01995 201 aaKnown RBP10.31□□□□□ -0.76
PTPN4-201ENST00000263708 ADAMTSL4Q6UY14 1074 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 ADAT1Q9BUB4 502 aaKnown RBP10.31□□□□□ -0.76
PTPN4-201ENST00000263708 C20orf141Q9NUB4 165 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 NID2Q14112 1375 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 C9orf172C9J069 976 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 COL9A3Q14050 684 aaPredicted RBP10.31□□□□□ -0.76
PTPN4-201ENST00000263708 SLC25A26Q70HW3 274 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 OLIG3Q7RTU3 272 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 DEFB123Q8N688 67 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 OR1L1Q8NH94 360 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 DYNC2LI1Q8TCX1 351 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 LHX3Q9UBR4 397 aa10.31□□□□□ -0.76
PTPN4-201ENST00000263708 AMMECR1Q9Y4X0 333 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 1328 ms