RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CD74P04233 296 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 SLC6A9P48067 706 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 B3GALT5-AS1P59052 145 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 OR13C8Q8NGS7 320 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 NPRL2Q8WTW4 380 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 PIGQQ9BRB3 760 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 GPR87Q9BY21 358 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 BANF2Q9H503 90 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 MRPS28Q9Y2Q9 187 aaKnown RBP16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 IGKV1-9A0A0C4DH69 117 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 TMEM14DPA8MWL7 114 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 STMND1H3BQB6 276 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 HCKP08631 526 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 DBHP09172 617 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 ICAM2P13598 275 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 GRB2P62993 217 aaKnown RBP16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 RAC1P63000 192 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 CSNK2A1P68400 391 aaPredicted RBP16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 FAM209AQ5JX71 171 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 C10orf128Q5T292 105 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 ATPAF1Q5TC12 328 aaPredicted RBP16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 RAB12Q6IQ22 244 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 PGAM5Q96HS1 289 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 C1orf147Q96MC9 270 aaPredicted RBP16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 SLCO5A1Q9H2Y9 848 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 PCSK5Q92824 1860 aa16.44■□□□□ 0.22
PDLIM4-201ENST00000253754 C21orf140B9A014 251 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 NOS1APO75052 506 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 OR4E1P0C645 316 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 CCL1P22362 96 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 NTF4P34130 210 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 GUCA1AP43080 201 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 LSM6P62312 80 aaKnown RBP16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 POU4F3Q15319 338 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 OR5D18Q8NGL1 313 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 OR14L1PQ8NHC6 308 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 TMEM41AQ96HV5 264 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 NAA11Q9BSU3 229 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 CLEC4MQ9H2X3 399 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 DHHO43323 396 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 MPIG6BO95866 241 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 HPP00738 406 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 P04436 131 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 ERCC1P07992 297 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 RSPO1Q2MKA7 263 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 DOK3Q7L591 496 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 OR14K1Q8NGZ2 314 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 ULBP2Q9BZM5 246 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 LPAR5Q9H1C0 372 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 B3GNT2Q9NY97 397 aa16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 FOXD3Q9UJU5 478 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-201ENST00000253754 M0R233 179 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 TERTO14746 1132 aaKnown RBP16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 SSX5O60225 188 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 VAMP5O95183 116 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 STARP49675 285 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 CAPZA1P52907 286 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 DHODHQ02127 395 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 C11orf88Q6PI97 169 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 ARMC10Q8N2F6 343 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 OR10R2Q8NGX6 335 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 PNPLA2Q96AD5 504 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 MRGPRFQ96AM1 343 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 DEPPQ9NTK1 212 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 KCNK7Q9Y2U2 307 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 RTTNQ86VV8 2226 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 NCOA6Q14686 2063 aaPredicted RBP16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 OR14I1A6ND48 311 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 F5H5P2 479 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 SOCS1O15524 211 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 CDH26Q8IXH8 852 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 IL22RA1Q8N6P7 574 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 GJC3Q8NFK1 279 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 FBXO17Q96EF6 278 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 RADILQ96JH8 1075 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 SGCZQ96LD1 299 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 UPB1Q9UBR1 384 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 IL17BQ9UHF5 180 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 VSIG4Q9Y279 399 aa16.42■□□□□ 0.22
PDLIM4-201ENST00000253754 LRRC3CA6NJW4 275 aa16.41■□□□□ 0.22
PDLIM4-201ENST00000253754 LEUTXA8MZ59 168 aa16.41■□□□□ 0.22
PDLIM4-201ENST00000253754 MELTFP08582 738 aa16.41■□□□□ 0.22
PDLIM4-201ENST00000253754 HRH1P35367 487 aa16.41■□□□□ 0.22
PDLIM4-201ENST00000253754 OR3A3P47888 321 aa16.41■□□□□ 0.22
PDLIM4-201ENST00000253754 OPCMLQ14982 345 aa16.41■□□□□ 0.22
PDLIM4-201ENST00000253754 RNASE10Q5GAN6 216 aaKnown RBP16.41■□□□□ 0.22
PDLIM4-201ENST00000253754 PLAC9Q5JTB6 97 aa16.41■□□□□ 0.22
PDLIM4-201ENST00000253754 PGAP1Q75T13 922 aa16.41■□□□□ 0.22
PDLIM4-201ENST00000253754 GGNQ86UU5 652 aa16.41■□□□□ 0.22
PDLIM4-201ENST00000253754 ROBO4Q8WZ75 1007 aa16.41■□□□□ 0.22
PDLIM4-201ENST00000253754 GPER1Q99527 375 aa16.41■□□□□ 0.22
PDLIM4-201ENST00000253754 SLC25A21Q9BQT8 299 aaPredicted RBP16.41■□□□□ 0.22
PDLIM4-201ENST00000253754 CEP295Q9C0D2 2601 aa16.41■□□□□ 0.22
PDLIM4-201ENST00000253754 PINLYPA6NC86 204 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 L7N2F9 121 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 ARPC5O15511 151 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 CDC14BO60729 498 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 NR2C1P13056 603 aa16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 NFYAP23511 347 aaPredicted RBP16.4■□□□□ 0.22
PDLIM4-201ENST00000253754 SUCLG1P53597 346 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms