RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 TIGD6Q17RP2 521 aa17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 ZNF672Q499Z4 452 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 RGS7BPQ6MZT1 257 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 FBXW12Q6X9E4 464 aa17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 CDH24Q86UP0 819 aa17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 OR2AE1Q8NHA4 323 aa17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 LILRB1Q8NHL6 650 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 OPALINQ96PE5 141 aa17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 MRPS26Q9BYN8 205 aaKnown RBP17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 OR2J1Q9GZK6 312 aa17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 PTTG3PQ9NZH4 202 aa17.04■□□□□ 0.32
PDLIM2-221ENST00000622702 E7EQL1 145 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 ZFPL1O95159 310 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 ISG15P05161 165 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 HSMCR30P0CW71 290 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 JUNBP17275 347 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 CELP19835 753 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 THBS4P35443 961 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 GK2Q14410 553 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 NEDD8Q15843 81 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 ZNF718Q3SXZ3 478 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 SPATA46Q5T0L3 261 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 SYT6Q5T7P8 510 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 TMEM244Q5VVB8 128 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 ZFP41Q8N8Y5 198 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 OR5AK2Q8NH90 309 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 OR51E1Q8TCB6 317 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 KLF14Q8TD94 323 aaPredicted RBP17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 AKAP1Q92667 903 aaKnown RBP eCLIP17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 NEUROG1Q92886 237 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 ITFG2Q969R8 447 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 MUL1Q969V5 352 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 REEP6Q96HR9 211 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 REPIN1Q9BWE0 567 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 UBTD1Q9HAC8 227 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 AKAP6Q13023 2319 aa17.03■□□□□ 0.32
PDLIM2-221ENST00000622702 A0A1B0GTI1 187 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 INMTO95050 263 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 RAC2P15153 192 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 ZNF250P15622 560 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 CPEP16870 476 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 CCL1P22362 96 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 MSMPQ1L6U9 139 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 MBNL2Q5VZF2 373 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 Q6ZSR3 168 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 ZNF676Q8N7Q3 588 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 PLPP7Q8NBV4 271 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 UFD1Q92890 307 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 LYZL4Q96KX0 146 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 PGLYRP3Q96LB9 341 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 PDCD1LG2Q9BQ51 273 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 COMMD4Q9H0A8 199 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 GPR84Q9NQS5 396 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 CMAHPQ9Y471 501 aa17.02■□□□□ 0.32
PDLIM2-221ENST00000622702 hCG_38984A0A1B0GV85 526 aa17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 LOC390937A0A1W2PQ73 354 aa17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 VSTM5A8MXK1 200 aa17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 P2RY10O00398 339 aa17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 ACHEP22303 614 aa17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 PSMB9P28065 219 aa17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 SLC3A1Q07837 685 aa17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 HLXQ14774 488 aaPredicted RBP17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 GFOD2Q3B7J2 385 aa17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 ARMCX4Q5H9R4 360 aa17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 VHLLQ6RSH7 139 aa17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 PGAP1Q75T13 922 aa17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 MRPL21Q7Z2W9 205 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 GHSRQ92847 366 aa17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 HAVCR1Q96D42 359 aa17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 CISD1Q9NZ45 108 aaKnown RBP17.01■□□□□ 0.31
PDLIM2-221ENST00000622702 PNMA8CA0A1B0GUJ8 204 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 LOC107986453A0A1B0GWG9 222 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 CLPTM1O96005 669 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 CD53P19397 219 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 GCH1P30793 250 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 MPV17P39210 176 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 GP2P55259 537 aaKnown RBP17■□□□□ 0.31
PDLIM2-221ENST00000622702 FAM3AP98173 230 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 ADIPOQQ15848 244 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 ODF4Q2M2E3 257 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 DOK3Q7L591 496 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 PHC2Q8IXK0 858 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 RDH10Q8IZV5 341 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 CCDC54Q8NEL0 328 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 SYNPRQ8TBG9 265 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 MRPL24Q96A35 216 aaKnown RBP17■□□□□ 0.31
PDLIM2-221ENST00000622702 CMBLQ96DG6 245 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 DHRS9Q9BPW9 319 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 EDARQ9UNE0 448 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 ZNF281Q9Y2X9 895 aa17■□□□□ 0.31
PDLIM2-221ENST00000622702 IGLV3-9A0A075B6K5 115 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 A0A1B0GVI7 797 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 SYT7O43581 403 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 APOBEC3AP31941 199 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 FABP6P51161 128 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 PSG7Q13046 419 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 OR8B8Q15620 311 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 TSTQ16762 297 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 LIPKQ5VXJ0 399 aa16.99■□□□□ 0.31
PDLIM2-221ENST00000622702 PAMR1Q6UXH9 720 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms