RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 CHRAC1Q9NRG0 131 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 SLC2A8Q9NY64 477 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 LGALS13Q9UHV8 139 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 ZNF230Q9UIE0 474 aaPredicted RBP2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 TBC1D24Q9ULP9 559 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 GMEB1Q9Y692 573 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 MAP3K19Q56UN5 1328 aa2.14□□□□□ -2.07
SCAMP1-205ENST00000614488 TRAV25A0A0B4J276 109 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 GABRR3A8MPY1 467 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 HSBP1L1C9JCN9 74 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 K7ERQ8 282 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 EIF3HO15372 352 aaKnown RBP eCLIP2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 YKT6O15498 198 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 CDC40O60508 579 aaKnown RBP eCLIP2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 EIF1BO60739 113 aaKnown RBP2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 GLSO94925 669 aaPredicted RBP2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 MBP02144 154 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 ACSM4P0C7M7 580 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 STAG3L2P0CL84 134 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 TNNI1P19237 187 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 SRMP19623 302 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 U2AF2P26368 475 aaKnown RBP eCLIP2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 EIF1P41567 113 aaKnown RBP2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 C21orf59P57076 290 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 RBX1P62877 108 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 XRCC4Q13426 336 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 ZNF829Q3KNS6 432 aaPredicted RBP2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 NKAIN1Q4KMZ8 207 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 PLCXD3Q63HM9 321 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 PDPK2PQ6A1A2 396 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 TMEM53Q6P2H8 277 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 TMEM220Q6QAJ8 160 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 DEGS2Q6QHC5 323 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 TMEM107Q6UX40 140 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 C16orf47Q6ZP98 133 aaPredicted RBP2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 COMTD1Q86VU5 262 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 SPATA24Q86W54 205 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 NKAIN4Q8IVV8 208 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 CD302Q8IX05 232 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 SYCE1Q8N0S2 351 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 ZNF664Q8N3J9 261 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 TRIML2Q8N7C3 387 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 ASCC1Q8N9N2 400 aaKnown RBP2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 C11orf72Q8NBR9 251 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 TSEN15Q8WW01 171 aaKnown RBP2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 ASZ1Q8WWH4 475 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 PRRC1Q96M27 445 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 ZNF396Q96N95 335 aaPredicted RBP2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 LLPHQ9BRT6 129 aaKnown RBP2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 CENPKQ9BS16 269 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 ANGPTL4Q9BY76 406 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 BLZF1Q9H2G9 400 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 FBXO44Q9H4M3 255 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 RGCCQ9H4X1 137 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 SPACA1Q9HBV2 294 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 TREM1Q9NP99 234 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 MRPL22Q9NWU5 206 aaKnown RBP2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 HRASLS2Q9NWW9 162 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 UXTQ9UBK9 157 aaPredicted RBP2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 C15orf41Q9Y2V0 281 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 RHBDD3Q9Y3P4 386 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 AK9Q5TCS8 1911 aa2.13□□□□□ -2.07
SCAMP1-205ENST00000614488 IGHV1-3A0A0C4DH29 117 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 ZNF701M0R085 212 aaPredicted RBP2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 PSMD11O00231 422 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 EIF4E2O60573 245 aaKnown RBP2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 YEATS4O95619 227 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 FTH1P02794 183 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 CLTAP09496 248 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 CT45A6P0DMU7 189 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 CT45A5P0DMU8 189 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 CT45A7P0DMV0 189 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 PRKACAP17612 351 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 RGS8P57771 180 aaPredicted RBP2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 RPL23P62829 140 aaKnown RBP2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 IRF8Q02556 426 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 CHRNA6Q15825 494 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 HNRNPA1L2Q32P51 320 aaKnown RBP2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 HSP90AA4PQ58FG1 418 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 YIF1BQ5BJH7 314 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 BEX5Q5H9J7 111 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 CT45A1Q5HYN5 189 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 SOHLH1Q5JUK2 328 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 ERICH5Q6P6B1 374 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 VTCN1Q7Z7D3 282 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 GTPBP8Q8N3Z3 284 aaPredicted RBP2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 LINC00469Q8N7U9 141 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 ZNF680Q8NEM1 530 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 OR11H7Q8NGC8 314 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 CT45A3Q8NHU0 189 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 GPX8Q8TED1 209 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 ZNF317Q96PQ6 595 aaPredicted RBP2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 SLC29A1Q99808 456 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 BBS2Q9BXC9 721 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 SAMD10Q9BYL1 202 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 ANKRD60Q9BZ19 345 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 TDRD3Q9H7E2 651 aaKnown RBP2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 C8orf33Q9H7E9 229 aaPredicted RBP2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 NRBP2Q9NSY0 501 aa2.12□□□□□ -2.07
SCAMP1-205ENST00000614488 RHBDL2Q9NX52 303 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms