RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, human

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-215	ENST00000597649	WFDC12	Q8WWY7	111 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	MBOAT4	Q96T53	435 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	FN3K	Q9H479	309 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	PRDM13	Q9H4Q3	707 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	ELOVL3	Q9HB03	270 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	TMEM165	Q9HC07	324 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	IMPAD1	Q9NX62	359 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	PPP1R3C	Q9UQK1	317 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	GMPPB	Q9Y5P6	360 aa		13.76	□□□□□ -0.21
SHKBP1-215	ENST00000597649	CTLA4	P16410	223 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	KITLG	P21583	273 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	MDH2	P40926	338 aa	Known RBP	13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	ENDOG	Q14249	297 aa	Known RBP	13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	DEFB112	Q30KQ8	113 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	ZMAT1	Q5H9K5	638 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	ZNF362	Q5T0B9	420 aa	Predicted RBP	13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	C12orf73	Q69YU5	71 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	ALDH16A1	Q8IZ83	802 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	DHRSX	Q8N5I4	330 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	PROKR2	Q8NFJ6	384 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	OR9Q1	Q8NGQ5	310 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	NRG4	Q8WWG1	115 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	CYGB	Q8WWM9	190 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	CMBL	Q96DG6	245 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	OR5V1	Q9UGF6	321 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	IL19	Q9UHD0	177 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	B9D1	Q9UPM9	204 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	COA3	Q9Y2R0	106 aa	Predicted RBP	13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	STARD10	Q9Y365	291 aa		13.75	□□□□□ -0.21
SHKBP1-215	ENST00000597649	LOC100130705	A0A1B0GUX0	176 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	FAM183A	A6NL82	134 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	KNG1	P01042	644 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	HLA-DQA2	P01906	255 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	TNFRSF1A	P19438	455 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	TNFSF4	P23510	183 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	GGT2	P36268	569 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	SLC25A1	P53007	311 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	TTC23	Q5W5X9	447 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	PLBD1	Q6P4A8	553 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	LRRN1	Q6UXK5	716 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	BRD3OS	Q6XYD6	125 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	FOXL2NB	Q6ZUU3	175 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	CPO	Q8IVL8	374 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	GLB1L2	Q8IW92	636 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	OR6V1	Q8N148	313 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	TCEANC	Q8N8B7	351 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	OR10S1	Q8NGN2	331 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	FAM81A	Q8TBF8	368 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	RAB40A	Q8WXH6	277 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	HRASLS5	Q96KN8	279 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	TSSK2	Q96PF2	358 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	OR2V2	Q96R30	315 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	CITED1	Q99966	193 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	OR51V1	Q9H2C8	321 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	GCM1	Q9NP62	436 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	TNFRSF19	Q9NS68	423 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	FAM118A	Q9NWS6	357 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	LRCH1	Q9Y2L9	728 aa		13.74	□□□□□ -0.21
SHKBP1-215	ENST00000597649	TRAV40	A0A0B4J280	105 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	IGHV2-70D	A0A0C4DH43	119 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	PRKY	O43930	277 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	ABHD16A	O95870	558 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	PYCR1	P32322	319 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	MMP16	P51512	607 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	RPS7	P62081	194 aa	Known RBP	13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	KLHL12	Q53G59	568 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	KLB	Q86Z14	1044 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	TMEM163	Q8TC26	289 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	HAVCR1	Q96D42	359 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	IL4I1	Q96RQ9	567 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	DDO	Q99489	341 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	APOL4	Q9BPW4	351 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	MED20	Q9H944	212 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	BEX1	Q9HBH7	125 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	TBCCD1	Q9NVR7	557 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	C1RL	Q9NZP8	487 aa		13.73	□□□□□ -0.21
SHKBP1-215	ENST00000597649	KIR2DS1	A0A191URI9	304 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649		A0A1B0GUS0	222 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	DCTN6	O00399	190 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	SLC16A6	O15403	523 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	GYPB	P06028	91 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	SPI1	P17947	270 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	MSR1	P21757	451 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	BLVRA	P53004	296 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	RAG2	P55895	527 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	PCBD1	P61457	104 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	SNCB	Q16143	134 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	OLFML2A	Q68BL7	652 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	FIP1L1	Q6UN15	594 aa	Known RBP	13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	BTNL3	Q6UXE8	466 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	C17orf107	Q6ZR85	190 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	ZBTB46	Q86UZ6	589 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	OR51L1	Q8NGJ5	315 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	OR8J1	Q8NGP2	316 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	OR6K6	Q8NGW6	343 aa		13.72	□□□□□ -0.21
SHKBP1-215	ENST00000597649	TRUB1	Q8WWH5	349 aa	Known RBP	13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms