RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 DHFR2Q86XF0 187 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 FITM2Q8N6M3 262 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 ZDHHC22Q8N966 263 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 CYB561A3Q8NBI2 242 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 SLC37A3Q8NCC5 494 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 OR9Q2Q8NGE9 314 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 OR2T29Q8NH02 315 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 SGMS2Q8NHU3 365 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 RAB40AQ8WXH6 277 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 UPRTQ96BW1 309 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 NSL1Q96IY1 281 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 TMEM246Q9BRR3 403 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 COPS4Q9BT78 406 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 ADAT1Q9BUB4 502 aaKnown RBP6.36□□□□□ -1.39
NPC1-208ENST00000590301 TSSK6Q9BXA6 273 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 NMNAT2Q9BZQ4 307 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 FN3KQ9H479 309 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 TOR3AQ9H497 397 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 WDR76Q9H967 626 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 C14orf119Q9NWQ9 140 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 KIF17Q9P2E2 1029 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 CLN8Q9UBY8 286 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 SAMHD1Q9Y3Z3 626 aaKnown RBP6.36□□□□□ -1.39
NPC1-208ENST00000590301 COMMD3-BMI1R4GMX3 469 aa6.36□□□□□ -1.39
NPC1-208ENST00000590301 MGAM2Q2M2H8 2515 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 TCRBV5S2A0A599 114 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 GGT3PA6NGU5 568 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 LGALS8O00214 317 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 ENSAO43768 121 aaKnown RBP6.35□□□□□ -1.39
NPC1-208ENST00000590301 FAM20BO75063 409 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 RGS9O75916 674 aaPredicted RBP6.35□□□□□ -1.39
NPC1-208ENST00000590301 FAM107AO95990 144 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 CYB5R3P00387 301 aaPredicted RBP6.35□□□□□ -1.39
NPC1-208ENST00000590301 HLA-DPB1P04440 258 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 SPARCP09486 303 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 RAP2AP10114 183 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 SPI1P17947 270 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 PAICSP22234 425 aaKnown RBP6.35□□□□□ -1.39
NPC1-208ENST00000590301 CA6P23280 308 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 PYCR1P32322 319 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 CD80P33681 288 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 GRK5P34947 590 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 PSMB10P40306 273 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 SEC61A1P61619 476 aaKnown RBP6.35□□□□□ -1.39
NPC1-208ENST00000590301 ZNF92Q03936 586 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 CRMP1Q14194 572 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 TAF13Q15543 124 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 KLF17Q5JT82 389 aaPredicted RBP6.35□□□□□ -1.39
NPC1-208ENST00000590301 PARP8Q8N3A8 854 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 FTMTQ8N4E7 242 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 SIGLECL1Q8N7X8 197 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 CCDC197Q8NCU1 140 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 OR52H1Q8NGJ2 320 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 OR8D4Q8NGM9 314 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 OR10S1Q8NGN2 331 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 OR9Q1Q8NGQ5 310 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 ZNF420Q8TAQ5 688 aaPredicted RBP6.35□□□□□ -1.39
NPC1-208ENST00000590301 TEX47Q8TBZ9 253 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 ITFG2Q969R8 447 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 SPSB4Q96A44 273 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 SLC25A28Q96A46 364 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 DACT3Q96B18 629 aaPredicted RBP6.35□□□□□ -1.39
NPC1-208ENST00000590301 SLAMF6Q96DU3 332 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 ASB9Q96DX5 294 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 LRGUKQ96M69 825 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 KCNJ15Q99712 375 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 PLA2G12AQ9BZM1 189 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 MS4A7Q9GZW8 240 aaPredicted RBP6.35□□□□□ -1.39
NPC1-208ENST00000590301 C1orf21Q9H246 121 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 RGCCQ9H4X1 137 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 ESM1Q9NQ30 184 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 CMC2Q9NRP2 79 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 RNF7Q9UBF6 113 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 ZNF69Q9UC07 566 aa6.35□□□□□ -1.39
NPC1-208ENST00000590301 TRAV38-1A0A0B4J264 116 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 DHRS12A0PJE2 317 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 DNAJC9-AS1A6NH13 148 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 TVP23AA6NH52 213 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 ANKRD30BLA7E2S9 258 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 ZNF593O00488 134 aaPredicted RBP6.34□□□□□ -1.39
NPC1-208ENST00000590301 TIPRLO75663 272 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 PLATP00750 562 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 RNASE1P07998 156 aaKnown RBP6.34□□□□□ -1.39
NPC1-208ENST00000590301 HKR1P10072 659 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 HSD11B1P28845 292 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 PMELP40967 661 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 BAMBIQ13145 260 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 SNAI3Q3KNW1 292 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 GLYATL3Q5SZD4 288 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 WDR25Q64LD2 544 aaPredicted RBP6.34□□□□□ -1.39
NPC1-208ENST00000590301 SHFQ7M4L6 423 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 NAA40Q86UY6 237 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 THNSL2Q86YJ6 484 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 OR10G2Q8NGC3 310 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 OR6K6Q8NGW6 343 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 OR4Q3Q8NH05 313 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 RNF133Q8WVZ7 376 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 C22orf15Q8WYQ4 148 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 INTS14Q96SY0 518 aa6.34□□□□□ -1.39
NPC1-208ENST00000590301 NUDT16L1Q9BRJ7 211 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms