RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 LRRN1Q6UXK5 716 aa8.46□□□□□ -1.06
GGA3-209ENST00000580646 KRT77Q7Z794 578 aa8.46□□□□□ -1.06
GGA3-209ENST00000580646 ACBD7Q8N6N7 88 aa8.46□□□□□ -1.06
GGA3-209ENST00000580646 OR52H1Q8NGJ2 320 aa8.46□□□□□ -1.06
GGA3-209ENST00000580646 SLC25A40Q8TBP6 338 aa8.46□□□□□ -1.06
GGA3-209ENST00000580646 KLF14Q8TD94 323 aaPredicted RBP8.46□□□□□ -1.06
GGA3-209ENST00000580646 LGALS12Q96DT0 336 aa8.46□□□□□ -1.06
GGA3-209ENST00000580646 MRPL48Q96GC5 212 aaKnown RBP8.46□□□□□ -1.06
GGA3-209ENST00000580646 MED30Q96HR3 178 aa8.46□□□□□ -1.06
GGA3-209ENST00000580646 MRPL37Q9BZE1 423 aaKnown RBP8.46□□□□□ -1.06
GGA3-209ENST00000580646 OR2J1Q9GZK6 312 aa8.46□□□□□ -1.06
GGA3-209ENST00000580646 MS4A5Q9H3V2 200 aa8.46□□□□□ -1.06
GGA3-209ENST00000580646 RGCCQ9H4X1 137 aa8.46□□□□□ -1.06
GGA3-209ENST00000580646 MOB1AQ9H8S9 216 aa8.46□□□□□ -1.06
GGA3-209ENST00000580646 FGF20Q9NP95 211 aaPredicted RBP8.46□□□□□ -1.06
GGA3-209ENST00000580646 CYSLTR2Q9NS75 346 aa8.46□□□□□ -1.06
GGA3-209ENST00000580646 ZMAT5Q9UDW3 170 aaKnown RBP8.46□□□□□ -1.06
GGA3-209ENST00000580646 ZNF391Q9UJN7 358 aa8.46□□□□□ -1.06
GGA3-209ENST00000580646 COPS3Q9UNS2 423 aa8.46□□□□□ -1.06
GGA3-209ENST00000580646 ZANQ9Y493 2812 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 IGHV4-30-2A0A087WSY4 118 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 A0A1W2PQL4 384 aaPredicted RBP8.45□□□□□ -1.06
GGA3-209ENST00000580646 INAFM1C9JVW0 142 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 M0R233 179 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 LCATP04180 440 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 SELEP16581 610 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 CFL1P23528 166 aaKnown RBP8.45□□□□□ -1.06
GGA3-209ENST00000580646 SLC6A9P48067 706 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 PRKXP51817 358 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 RIDAP52758 137 aaKnown RBP8.45□□□□□ -1.06
GGA3-209ENST00000580646 HCCSP53701 268 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 ERVS71-1P61550 626 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 ACTA2P62736 377 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 ACTG2P63267 376 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 MALLQ13021 153 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 ZNF829Q3KNS6 432 aaPredicted RBP8.45□□□□□ -1.06
GGA3-209ENST00000580646 CDONQ4KMG0 1287 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 ZMAT1Q5H9K5 638 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 C6orf52Q5T4I8 152 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 ZNF684Q5T5D7 378 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 PLEKHG7Q6ZR37 379 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 KCTD20Q7Z5Y7 419 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 SYS1Q8N2H4 156 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 ZNF525Q8N782 197 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 ZNF283Q8N7M2 679 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 CNIH3Q8TBE1 160 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 HAVCR2Q8TDQ0 301 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 BORCS5Q969J3 196 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 SPSB4Q96A44 273 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 HAVCR1Q96D42 359 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 OR51B6Q9H340 312 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 CNOT2Q9NZN8 540 aaKnown RBP8.45□□□□□ -1.06
GGA3-209ENST00000580646 AASSQ9UDR5 926 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 STARD10Q9Y365 291 aa8.45□□□□□ -1.06
GGA3-209ENST00000580646 A0A0U1RQV5 110 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 IQCF6A8MYZ5 107 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 PRR32B1ATL7 298 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 SRSF10O75494 262 aaKnown RBP8.44□□□□□ -1.06
GGA3-209ENST00000580646 F12P00748 615 aaPredicted RBP8.44□□□□□ -1.06
GGA3-209ENST00000580646 MT-ND5P03915 603 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 KRT8P05787 483 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 ADH4P08319 380 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 TACSTD2P09758 323 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 NAT2P11245 290 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 DCKP27707 260 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 MMP15P51511 669 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 BCAP31P51572 246 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 CHN2P52757 468 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 ZNF121P58317 390 aaPredicted RBP8.44□□□□□ -1.06
GGA3-209ENST00000580646 CTAG1AP78358 180 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 ZNF85Q03923 595 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 PSG7Q13046 419 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 MRPL28Q13084 256 aaKnown RBP8.44□□□□□ -1.06
GGA3-209ENST00000580646 GALEQ14376 348 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 GK2Q14410 553 aaPredicted RBP8.44□□□□□ -1.06
GGA3-209ENST00000580646 SNAI3Q3KNW1 292 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 FAM209AQ5JX71 171 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 SPATC1Q76KD6 591 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 SSX6Q7RTT6 188 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 NAA40Q86UY6 237 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 LRP11Q86VZ4 500 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 RFLNBQ8N5W9 214 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 MINDY2Q8NBR6 621 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 OR10H4Q8NGA5 316 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 OR52I1Q8NGK6 324 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 SNX33Q8WV41 574 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 FAM168AQ92567 244 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 DIRC2Q96SL1 478 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 MDFIQ99750 246 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 VRK1Q99986 396 aaPredicted RBP8.44□□□□□ -1.06
GGA3-209ENST00000580646 ZNF649Q9BS31 505 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 REPIN1Q9BWE0 567 aaKnown RBP8.44□□□□□ -1.06
GGA3-209ENST00000580646 OR10A2Q9H208 303 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 FAM206AQ9NX38 181 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 NKIRAS2Q9NYR9 191 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 MRM2Q9UI43 246 aaKnown RBP8.44□□□□□ -1.06
GGA3-209ENST00000580646 PURGQ9UJV8 347 aaKnown RBP8.44□□□□□ -1.06
GGA3-209ENST00000580646 IKZF2Q9UKS7 526 aa8.44□□□□□ -1.06
GGA3-209ENST00000580646 DIMT1Q9UNQ2 313 aaKnown RBP8.44□□□□□ -1.06
GGA3-209ENST00000580646 R4GMQ9 66 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms