RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 NMES1Q9C002 83 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 LPAR5Q9H1C0 372 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 TMEM100Q9NV29 134 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 FBXO9Q9UK97 447 aaPredicted RBP15.5■□□□□ 0.07
SCARF1-205ENST00000571272 OPN1LWP04000 364 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 BIDP55957 195 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 Q6ZS52 159 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 H1FNTQ75WM6 255 aaPredicted RBP15.5■□□□□ 0.07
SCARF1-205ENST00000571272 RAB11FIP2Q7L804 512 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 OR1N1Q8NGS0 311 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 CLEC1BQ9P126 229 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 SUSD2Q9UGT4 822 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 KLF2Q9Y5W3 355 aaPredicted RBP15.5■□□□□ 0.07
SCARF1-205ENST00000571272 TMEM14DPA8MWL7 114 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 TO15178 435 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 FARS2O95363 451 aaKnown RBP15.5■□□□□ 0.07
SCARF1-205ENST00000571272 FAM157CP0CG43 387 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 NFYBP25208 207 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 CX3CR1P49238 355 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 DAP3P51398 398 aaKnown RBP15.5■□□□□ 0.07
SCARF1-205ENST00000571272 FBXO46Q6PJ61 603 aaPredicted RBP15.5■□□□□ 0.07
SCARF1-205ENST00000571272 CLEC18BQ6UXF7 455 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 C2CD4CQ8TF44 421 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 UQCC2Q9BRT2 126 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 SEC61A2Q9H9S3 476 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 GPR27Q9NS67 375 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 WBP1LQ9NX94 342 aa15.5■□□□□ 0.07
SCARF1-205ENST00000571272 TRBV6-7A0A0A0MS04 114 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 A0A1W2PPC4 97 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 ZNF354AO60765 605 aaPredicted RBP15.49■□□□□ 0.07
SCARF1-205ENST00000571272 HTR3BO95264 441 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 ZNF20P17024 532 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 ANOS1P23352 680 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 OR3A4PP47883 348 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 CCR5P51681 352 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 GFOD2Q3B7J2 385 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 OR51F2Q8NH61 342 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 RAB3CQ96E17 227 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 ESRP2Q9H6T0 727 aaKnown RBP15.49■□□□□ 0.07
SCARF1-205ENST00000571272 UQCC1Q9NVA1 299 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 RAD51DO75771 328 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 EN2P19622 333 aaPredicted RBP15.49■□□□□ 0.07
SCARF1-205ENST00000571272 TAS2R31P59538 309 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 CYCSP99999 105 aaKnown RBP15.49■□□□□ 0.07
SCARF1-205ENST00000571272 FOXRED2Q8IWF2 684 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 NKX2-4Q9H2Z4 354 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 GSKIPQ9P0R6 139 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 GPR132Q9UNW8 380 aa15.49■□□□□ 0.07
SCARF1-205ENST00000571272 MRPS28Q9Y2Q9 187 aaKnown RBP15.49■□□□□ 0.07
SCARF1-205ENST00000571272 SDCBPO00560 298 aaPredicted RBP15.48■□□□□ 0.07
SCARF1-205ENST00000571272 ARL4DP49703 201 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 RAB13P51153 203 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 FBXW4P57775 412 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 FOXK1P85037 733 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 MST1LQ2TV78 715 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 ABHD12BQ7Z5M8 362 aaPredicted RBP15.48■□□□□ 0.07
SCARF1-205ENST00000571272 ZFP82Q8N141 532 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 OR10C1Q96KK4 312 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 C12orf57Q99622 126 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 VN1R1Q9GZP7 353 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 METTL8Q9H825 291 aaKnown RBP15.48■□□□□ 0.07
SCARF1-205ENST00000571272 POLR1DQ9Y2S0 133 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 FBLP22087 321 aaKnown RBP15.48■□□□□ 0.07
SCARF1-205ENST00000571272 TMEM50BP56557 158 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 ANKRD55Q3KP44 614 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 DHRS7BQ6IAN0 325 aaPredicted RBP15.48■□□□□ 0.07
SCARF1-205ENST00000571272 OR1L3Q8NH93 324 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 TMEM234Q8WY98 164 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 MAFIPQ8WZ33 124 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 CMSS1Q9BQ75 279 aaKnown RBP15.48■□□□□ 0.07
SCARF1-205ENST00000571272 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.48■□□□□ 0.07
SCARF1-205ENST00000571272 MMP26Q9NRE1 261 aa15.48■□□□□ 0.07
SCARF1-205ENST00000571272 WDR87Q6ZQQ6 2873 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 LILRA5A6NI73 299 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 ADAM10O14672 748 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 TBPP20226 339 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 CDAP32320 146 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 NAAAQ02083 359 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 ARHGAP5-AS1Q96IT6 56 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 FAM71F1Q96KD3 344 aaPredicted RBP15.47■□□□□ 0.07
SCARF1-205ENST00000571272 ST6GALNAC5Q9BVH7 336 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 TPSD1Q9BZJ3 242 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 ZNF304Q9HCX3 659 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 CARHSP1Q9Y2V2 147 aaKnown RBP15.47■□□□□ 0.07
SCARF1-205ENST00000571272 FLVCR1Q9Y5Y0 555 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 CABIN1Q9Y6J0 2220 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 C10orf142B7Z368 130 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 AGPAT2O15120 278 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 SNAPINO95295 136 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 SFT2D2O95562 160 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 HOXA1P49639 335 aaPredicted RBP15.47■□□□□ 0.07
SCARF1-205ENST00000571272 SUPT4H1P63272 117 aaKnown RBP15.47■□□□□ 0.07
SCARF1-205ENST00000571272 RAB32Q13637 225 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 C10orf91Q5T1B1 145 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 PGAP1Q75T13 922 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 CHST11Q9NPF2 352 aa15.47■□□□□ 0.07
SCARF1-205ENST00000571272 H3BMH7 237 aa15.46■□□□□ 0.07
SCARF1-205ENST00000571272 HIST1H1DP16402 221 aaKnown RBP15.46■□□□□ 0.07
SCARF1-205ENST00000571272 S100A10P60903 97 aa15.46■□□□□ 0.07
SCARF1-205ENST00000571272 DCDP81605 110 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms