RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 NIPBLQ6KC79 2804 aaeCLIP11.17□□□□□ -0.62
SPG7-209ENST00000564047 LOC100506127A0A0U1RQW1 187 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 TMEM212A6NML5 194 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 OR4C45A6NMZ5 311 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 J3QW42 95 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 GPRIN2O60269 458 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 ICMTO60725 284 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 PFDN1O60925 122 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 SLC2A1P11166 492 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 CCL2P13500 99 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 PRF1P14222 555 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 CCNOP22674 350 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 KIR3DL2P43630 455 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 ZNF83P51522 516 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 ZNF45Q02386 682 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 SLC3A1Q07837 685 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 BCL2L15Q5TBC7 163 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 ZNF704Q6ZNC4 412 aaPredicted RBP11.17□□□□□ -0.62
SPG7-209ENST00000564047 COLCA1Q6ZS62 124 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 FAM57BQ71RH2 274 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 NAA40Q86UY6 237 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 MYPOPQ86VE0 399 aaPredicted RBP11.17□□□□□ -0.62
SPG7-209ENST00000564047 WFDC8Q8IUA0 241 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 CENPSQ8N2Z9 138 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 OR52H1Q8NGJ2 320 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 GHSRQ92847 366 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 PGAM5Q96HS1 289 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 PGLYRP3Q96LB9 341 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 CENPOQ9BU64 300 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 COMMD4Q9H0A8 199 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 BRD7Q9NPI1 651 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 NPDC1Q9NQX5 325 aaPredicted RBP11.17□□□□□ -0.62
SPG7-209ENST00000564047 NPAP1Q9NZP6 1156 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 GTF2A1LQ9UNN4 478 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 SLC22A13Q9Y226 551 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 MYO7BQ6PIF6 2116 aa11.17□□□□□ -0.62
SPG7-209ENST00000564047 PNMA8CA0A1B0GUJ8 204 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 ISPDA4D126 451 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 TUBAL3A6NHL2 446 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 M0R1B8 84 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 GPX5O75715 221 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 ZFPL1O95159 310 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 TTRP02766 147 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 LCATP04180 440 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 ISG15P05161 165 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 OCM2P0CE71 109 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 OCMP0CE72 109 aaPredicted RBP11.16□□□□□ -0.62
SPG7-209ENST00000564047 UBCP0CG48 685 aaKnown RBP11.16□□□□□ -0.62
SPG7-209ENST00000564047 EPXP11678 715 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 ZNF35P13682 527 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 GABRA5P31644 462 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 S100A5P33763 92 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 TGFBR1P36897 503 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 NAAAQ02083 359 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 OXA1LQ15070 435 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 TRAM1Q15629 374 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 ALKBH2Q6NS38 261 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 TMEM108Q6UXF1 575 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 PAQR4Q8N4S7 273 aaPredicted RBP11.16□□□□□ -0.62
SPG7-209ENST00000564047 MS4A15Q8N5U1 240 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 ZNF676Q8N7Q3 588 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 OR8B12Q8NGG6 310 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 OR5AK2Q8NH90 309 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 PPP1R14AQ96A00 147 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 APOBEC3DQ96AK3 386 aaPredicted RBP11.16□□□□□ -0.62
SPG7-209ENST00000564047 ZC3HAV1LQ96H79 300 aaKnown RBP11.16□□□□□ -0.62
SPG7-209ENST00000564047 OR10A2Q9H208 303 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 ZNF319Q9P2F9 582 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 EIF3KQ9UBQ5 218 aaKnown RBP11.16□□□□□ -0.62
SPG7-209ENST00000564047 SSR3Q9UNL2 185 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 ZNF281Q9Y2X9 895 aa11.16□□□□□ -0.62
SPG7-209ENST00000564047 SF3B6Q9Y3B4 125 aaKnown RBP11.16□□□□□ -0.62
SPG7-209ENST00000564047 IGHV2OR16-5A0A0B4J2B6 119 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 A0A0U1RQV5 110 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 TBX1O43435 398 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 XRCC2O43543 280 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 IGLV3-1P01715 115 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 CRYAAP02489 173 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 PTAFRP25105 342 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 CD40P25942 277 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 WNT5AP41221 380 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 CRYBB2P43320 205 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 ZNF181Q2M3W8 571 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 SNAI3Q3KNW1 292 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 YIF1BQ5BJH7 314 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 TMEM244Q5VVB8 128 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 UNQ6126/PRO20091Q6UXV3 157 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 LINC01560Q8TB33 94 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 PDCD1LG2Q9BQ51 273 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 RGCCQ9H4X1 137 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 ZNF391Q9UJN7 358 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 N6AMT1Q9Y5N5 214 aa11.15□□□□□ -0.62
SPG7-209ENST00000564047 PKDREJQ9NTG1 2253 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 C5orf63A6NC05 138 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 SERPINA3P01011 423 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 IL1AP01583 271 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 ACHEP22303 614 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 CCL1P22362 96 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 GALP22466 123 aa11.14□□□□□ -0.63
SPG7-209ENST00000564047 TUBG1P23258 451 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms