RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 GCSAMQ8N6F7 178 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 ZNF511Q8NB15 262 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 OR56B2PQ8NGI1 322 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 OR9Q1Q8NGQ5 310 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 OR11L1Q8NGX0 322 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 LHX4Q969G2 390 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 BTBD10Q9BSF8 475 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 NSRP1Q9H0G5 558 aaKnown RBP9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 SIRPDQ9H106 197 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 SEMA6AQ9H2E6 1030 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 SPAG4Q9NPE6 437 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 C1orf123Q9NWV4 160 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 CD300AQ9UGN4 299 aa9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 SAMD4AQ9UPU9 718 aaKnown RBP9.55□□□□□ -0.88
PRPF40B-212ENST00000551111 A0A0U1RQK1 487 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 GGT3PA6NGU5 568 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 ARPC2O15144 300 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 KNG1P01042 644 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 LHBP01229 141 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 IGHV4-59P01825 116 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 TFF1P04155 84 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 ZNF823P16415 610 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 TSPAN31Q12999 210 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 OR8B8Q15620 311 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 SLC36A3Q495N2 470 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 BTN2A1Q7KYR7 527 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 DCXRQ7Z4W1 244 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 SLC37A3Q8NCC5 494 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 GNPDA2Q8TDQ7 276 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 ERGIC1Q969X5 290 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 WDFY2Q96P53 400 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 FN3KRPQ9HA64 309 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 VNN3Q9NY84 501 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 ZNF319Q9P2F9 582 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 ERVK-18Q9QC07 812 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 COMMD3-BMI1R4GMX3 469 aa9.54□□□□□ -0.88
PRPF40B-212ENST00000551111 IGHV1-69DA0A0B4J2H0 117 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 OOEPA6NGQ2 149 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 P2RY10O00398 339 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 DVL1O14640 695 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 IDH3BO43837 385 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 GMDSO60547 372 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 GASTP01350 101 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 IGHV1-69P01742 117 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 HSD17B1P14061 328 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 AMY2BP19961 511 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 CSNK2BP67870 215 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 KLHL12Q53G59 568 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 OLFML2AQ68BL7 652 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 PROKR2Q8NFJ6 384 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 OR4Q3Q8NH05 313 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 CMTM5Q96DZ9 223 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 CDRT15Q96T59 188 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 CITED1Q99966 193 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 IL1RAPQ9NPH3 570 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 NOX4Q9NPH5 578 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 KRCC1Q9NPI7 259 aaPredicted RBP9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 CENPMQ9NSP4 180 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 ACOXLQ9NUZ1 547 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 ARL8BQ9NVJ2 186 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 DNAJB11Q9UBS4 358 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 LYVE1Q9Y5Y7 322 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 PLXNB1O43157 2135 aa9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 TET2Q6N021 2002 aaPredicted RBP9.53□□□□□ -0.88
PRPF40B-212ENST00000551111 TRAV38-1A0A0B4J264 116 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 hCG_1807616A0A1W2PRN6 198 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 CLPSL1A2RUU4 121 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 A6NLC8 198 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 ZNF593O00488 134 aaPredicted RBP9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 NDUFAB1O14561 156 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 GPR137BO60478 399 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 NDUFA7O95182 113 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 FABP3P05413 133 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 SPARCP09486 303 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 SELLP14151 372 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 NPY4RP50391 375 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 SMIM11AP58511 58 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 FAM3AP98173 230 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 CRMP1Q14194 572 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 PCK2Q16822 640 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 HIST2H2BDQ6DRA6 164 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 ASPHD2Q6ICH7 369 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 ZNF770Q6IQ21 691 aaPredicted RBP9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 DRAM2Q6UX65 266 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 ZDHHC21Q8IVQ6 265 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 OR4C15Q8NGM1 316 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 OR4F5Q8NH21 305 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 LINC01006Q8NI28 216 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 SPTSSAQ969W0 71 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 SGK3Q96BR1 496 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 SLAMF6Q96DU3 332 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 AMELYQ99218 206 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 CCL13Q99616 98 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 COPS4Q9BT78 406 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 NMNAT2Q9BZQ4 307 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 FAM107BQ9H098 131 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 MED20Q9H944 212 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 BEX1Q9HBH7 125 aa9.52□□□□□ -0.89
PRPF40B-212ENST00000551111 IL20Q9NYY1 176 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms