RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 IL21RQ9HBE5 538 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 RPS10P5Q9NQ39 176 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 TMEM242Q9NWH2 141 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 SIDT1Q9NXL6 827 aaKnown RBP4.7□□□□□ -1.66
USP28-213ENST00000544967 VSX1Q9NZR4 365 aaPredicted RBP4.7□□□□□ -1.66
USP28-213ENST00000544967 MRPL15Q9P015 296 aaKnown RBP4.7□□□□□ -1.66
USP28-213ENST00000544967 MOKQ9UQ07 419 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 OR5H15A6NDH6 313 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 OR5H1A6NKK0 313 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 DUXAA6NLW8 204 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 B4DEV8 164 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 OR10H2O60403 315 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 RAB3DO95716 219 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 RPN2P04844 631 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 RAB6AP20340 208 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 RPS4Y1P22090 263 aaKnown RBP4.7□□□□□ -1.66
USP28-213ENST00000544967 SLC6A6P31641 620 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 BSGP35613 385 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 PI4KAP42356 2102 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 ATP1B3P54709 279 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 OR2B8PP59922 312 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 TNFRSF9Q07011 255 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 SPOCK1Q08629 439 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 GXYLT1Q4G148 440 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 SPNS3Q6ZMD2 512 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 SLC35D2Q76EJ3 337 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 RANBP3LQ86VV4 465 aaPredicted RBP4.7□□□□□ -1.66
USP28-213ENST00000544967 NRMQ8IXM6 262 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 SLC35F2Q8IXU6 374 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 IZUMO1Q8IYV9 350 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 ACBD4Q8NC06 268 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 BHLHE23Q8NDY6 225 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 OR2L5Q8NG80 312 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 FLVCR1-AS1Q8TAF5 88 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 ZNF596Q8TC21 504 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 DTD1Q8TEA8 209 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 NEIL2Q969S2 332 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 S100PBPQ96BU1 408 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 MUCL1Q96DR8 90 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 OR2M4Q96R27 311 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 OR14A2Q96R54 314 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 MS4A8Q9BY19 250 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 ATG10Q9H0Y0 220 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 PTGES2Q9H7Z7 377 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 TRPC4Q9UBN4 977 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 PISDQ9UG56 409 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 SIGLEC7Q9Y286 467 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 KIR2DS5A0A0G2JLQ3 304 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 A0A0G2JNG1 304 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 LOC100289279A0A1B0GTE1 492 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 A0A1B0GVT2 93 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 KIR2DS3K7RE56 304 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 PPP1R2P9O14990 202 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 JTBO76095 146 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 LYPD3O95274 346 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 FARS2O95363 451 aaKnown RBP4.7□□□□□ -1.66
USP28-213ENST00000544967 F13BP05160 661 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 KLK1P06870 262 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 SEC11BP0C7V7 166 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 NPPBP16860 134 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 EDNRAP25101 427 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 ACVR1BP36896 505 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 SNCAP37840 140 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 TSFMP43897 325 aaKnown RBP4.7□□□□□ -1.66
USP28-213ENST00000544967 FXYD6P3P58550 94 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 TSTA3Q13630 321 aaPredicted RBP4.7□□□□□ -1.66
USP28-213ENST00000544967 KIR2DS5Q14953 304 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 ELOCQ15369 112 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 RSU1Q15404 277 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 TAF13Q15543 124 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 ELAVL1Q15717 326 aaKnown RBP4.7□□□□□ -1.66
USP28-213ENST00000544967 CLEC12AQ5QGZ9 265 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 DCAF10Q5QP82 559 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 STPG1Q5TH74 334 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 KHDRBS2Q5VWX1 349 aaKnown RBP4.7□□□□□ -1.66
USP28-213ENST00000544967 FRRS1Q6ZNA5 592 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 DPPA2Q7Z7J5 298 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 FAM129CQ86XR2 697 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 CDK20Q8IZL9 346 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 UBAC2Q8NBM4 344 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 OR10G4Q8NGN3 311 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 ASB5Q8WWX0 329 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 MEGF10Q96KG7 1140 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 CCNL2Q96S94 520 aaPredicted RBP4.7□□□□□ -1.66
USP28-213ENST00000544967 PRSS27Q9BQR3 290 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 PCBD2Q9H0N5 130 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 KIR3DX1Q9H7L2 352 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 CHRNA9Q9UGM1 479 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 ANAPC10Q9UM13 185 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 FBXO7Q9Y3I1 522 aa4.7□□□□□ -1.66
USP28-213ENST00000544967 PATE3B3GLJ2 98 aa4.69□□□□□ -1.66
USP28-213ENST00000544967 SLC17A2O00624 439 aa4.69□□□□□ -1.66
USP28-213ENST00000544967 DXOO77932 396 aaKnown RBP4.69□□□□□ -1.66
USP28-213ENST00000544967 SLC2A10O95528 541 aa4.69□□□□□ -1.66
USP28-213ENST00000544967 TNFP01375 233 aa4.69□□□□□ -1.66
USP28-213ENST00000544967 MBP02144 154 aa4.69□□□□□ -1.66
USP28-213ENST00000544967 CRYGCP07315 174 aa4.69□□□□□ -1.66
USP28-213ENST00000544967 PGAM2P15259 253 aa4.69□□□□□ -1.66
USP28-213ENST00000544967 FSTP19883 344 aa4.69□□□□□ -1.66
USP28-213ENST00000544967 NTSP30990 170 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms