RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 DEFB124Q8NES8 71 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 OR1J2Q8NGS2 313 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 GAL3ST3Q96A11 431 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 S100PBPQ96BU1 408 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 SGCZQ96LD1 299 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 METTL8Q9H825 291 aaKnown RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 CALHM2Q9HA72 323 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 SEBOXQ9HB31 216 aaPredicted RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 TMEM9BQ9NQ34 198 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 UFSP2Q9NUQ7 469 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 SLC23A2Q9UGH3 650 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 KCNS2Q9ULS6 477 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 MED12Q93074 2177 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 ZNF407Q9C0G0 2248 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 A0A1B0GTI1 187 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 A0A1B0GWJ7 208 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 K7EQS6 105 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 TCAPO15273 167 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 SRPX2O60687 465 aaPredicted RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 RAB3DO95716 219 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 WNT11O96014 354 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 SPI1P17947 270 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 POU3F1Q03052 451 aaPredicted RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 TGFBR3Q03167 851 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 GAMTQ14353 236 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 C10orf91Q5T1B1 145 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 ZNF529Q6P280 563 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 OPN5Q6U736 354 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 TMEM205Q6UW68 189 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 ZNF813Q6ZN06 617 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 RPS19BP1Q86WX3 136 aaKnown RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 C19orf47Q8N9M1 422 aaKnown RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 INO80EQ8NBZ0 244 aaPredicted RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 OR10R2Q8NGX6 335 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 ELP5Q8TE02 316 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 ELSPBP1Q96BH3 223 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 IP6K3Q96PC2 410 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 LMF1Q96S06 567 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 SLC25A21Q9BQT8 299 aaPredicted RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 TIMM29Q9BSF4 260 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 SEC11CQ9BY50 192 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 SLC7A11Q9UPY5 501 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 OTOGLQ3ZCN5 2332 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 CHD3Q12873 2000 aaKnown RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 A0A0B4J2E0 115 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 A0A1B0GX12 115 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 H7C1Q1 480 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 SLC31A2O15432 143 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 FGF16O43320 207 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 ACTL6BO94805 426 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 AMY2AP04746 511 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 HEXAP06865 529 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 MELTFP08582 738 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 DBHP09172 617 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 OR8G3PP0DMU2 310 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 TPT1P13693 172 aaKnown RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 IRF2P14316 349 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 RBM34P42696 430 aaKnown RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 RELQ04864 619 aaPredicted RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 RBPJQ06330 500 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 SRSF4Q08170 494 aaKnown RBP4.7□□□□□ -1.66
PROM1-220ENST00000540805 PEA15Q15121 130 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 LTC4SQ16873 150 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 DEFB109BQ30KR1 87 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 TMEM52BQ4KMG9 183 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 CLEC9AQ6UXN8 241 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 KCTD9Q7L273 389 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 TMEM200AQ86VY9 491 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 ARL6IP6Q8N6S5 226 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 OR51D1Q8NGF3 324 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 ZNF417Q8TAU3 575 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 PPP1R1CQ8WVI7 109 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 DEFB127Q9H1M4 99 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 FBXO4Q9UKT5 387 aa4.7□□□□□ -1.66
PROM1-220ENST00000540805 TRBV5-5A0A0J9YX44 114 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 A0A1B0GWA3 101 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 A0A1W2PPH5 198 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 MED19A0JLT2 244 aaPredicted RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 SLC33A1O00400 549 aaPredicted RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 LDLRAD4O15165 306 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 SLC16A7O60669 478 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 HLA-AP01891 365 aaKnown RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 ABCD3P28288 659 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 SDHAP31040 664 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 S100A7P31151 101 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 KIR2DL1P43626 348 aaPredicted RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 TSFMP43897 325 aaKnown RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 EFNB2P52799 333 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 ATP1B3P54709 279 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 MALLQ13021 153 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 DHRS2Q13268 280 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 INPP5JQ15735 1006 aaPredicted RBP4.69□□□□□ -1.66
PROM1-220ENST00000540805 C14orf28Q4W4Y0 310 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 AGBL4Q5VU57 503 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 LIPNQ5VXI9 398 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 C16orf54Q6UWD8 224 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 LRRC18Q8N456 261 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 OR4A4PQ8NGN8 299 aa4.69□□□□□ -1.66
PROM1-220ENST00000540805 OR2A1Q8NGT9 310 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms