RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ACKR1Q16570 336 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 TRMT12Q53H54 448 aaKnown RBP9.04□□□□□ -0.96
COL4A6-208ENST00000538570 LILRA3Q8N6C8 439 aaPredicted RBP9.04□□□□□ -0.96
COL4A6-208ENST00000538570 ZNF485Q8NCK3 441 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 OR8D4Q8NGM9 314 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 OLIG1Q8TAK6 271 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 MS4A6EQ96DS6 147 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 OR5V1Q9UGF6 321 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 KCNG2Q9UJ96 466 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 DOT1LQ8TEK3 1739 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 ANKRD12Q6UB98 2062 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 DBX1A6NMT0 343 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 OR7C2O60412 319 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 CD37P11049 281 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 COL5A1-AS1Q5SY13 56 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 BAP18Q8IXM2 172 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 KLHDC9Q8NEP7 349 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 CIB3Q96Q77 187 aaPredicted RBP9.04□□□□□ -0.96
COL4A6-208ENST00000538570 ATF6BQ99941 703 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 JAM3Q9BX67 310 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 P2RY12Q9H244 342 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 OR1A1Q9P1Q5 309 aa9.04□□□□□ -0.96
COL4A6-208ENST00000538570 KIF13AQ9H1H9 1805 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 HSPB2A8KAH6 182 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 SLC2A10O95528 541 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 IAPPP10997 89 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 COX5AP20674 150 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 HSPB2Q16082 182 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 METRNLQ641Q3 311 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 LAIR1Q6GTX8 287 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 LRP11Q86VZ4 500 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 RXFP4Q8TDU9 374 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 GPX8Q8TED1 209 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 MZB1Q8WU39 189 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 PSENENQ9NZ42 101 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 CRYBG1Q9Y4K1 1723 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 FAM166BA8MTA8 275 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 BCL2L11O43521 198 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 LRP3O75074 770 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 VN1R2Q8NFZ6 395 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 OR13H1Q8NG92 308 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 OR5AP2Q8NGF4 316 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 TAAR6Q96RI8 345 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 SMIM7Q9BQ49 75 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 HINT3Q9NQE9 182 aaKnown RBP9.03□□□□□ -0.96
COL4A6-208ENST00000538570 IGHV3-20A0A0C4DH32 117 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 A0A1W2PPQ1 181 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 ANKRD61A6NGH8 418 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 ZAR1LA6NP61 321 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 SNRPGP15A8MWD9 76 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 LEUTXA8MZ59 168 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 RNASEK-C17orf49H0YIS7 233 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 TOX3O15405 576 aaPredicted RBP9.03□□□□□ -0.96
COL4A6-208ENST00000538570 SOX15O60248 233 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 WDR1O75083 606 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 NRASP01111 189 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 OR4E1P0C645 316 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 DUSP8Q13202 625 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 ACSM5Q6NUN0 579 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 CMTM4Q8IZR5 234 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 LINC00518Q8N0U6 118 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 SLC39A7Q92504 469 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 YIPF6Q96EC8 236 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 C2orf50Q96LR7 162 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 MYH13Q9UKX3 1938 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 ELOA3CA0A087WX78 387 aaPredicted RBP9.03□□□□□ -0.96
COL4A6-208ENST00000538570 TARM1B6A8C7 271 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 GLRA1P23415 457 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 NCR3LG1Q68D85 454 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 DHRS13Q6UX07 377 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 MS4A10Q96PG2 267 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 LAT2Q9GZY6 243 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 UCK1Q9HA47 277 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 POMT2Q9UKY4 750 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 DAPP1Q9UN19 280 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 MEIKINA0A087WXM9 373 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 A0A1B0GUH1 482 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 SDCBPO00560 298 aaPredicted RBP9.03□□□□□ -0.96
COL4A6-208ENST00000538570 CST5P28325 142 aaPredicted RBP9.03□□□□□ -0.96
COL4A6-208ENST00000538570 VEGFBP49765 207 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 TTC32Q5I0X7 151 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 RPS19BP1Q86WX3 136 aaKnown RBP9.03□□□□□ -0.96
COL4A6-208ENST00000538570 OR1J1Q8NGS3 322 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 S1PR3Q99500 378 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 SLC5A6Q9Y289 635 aa9.03□□□□□ -0.96
COL4A6-208ENST00000538570 IGLV3-10A0A075B6K4 115 aa9.02□□□□□ -0.96
COL4A6-208ENST00000538570 M0R135 149 aa9.02□□□□□ -0.96
COL4A6-208ENST00000538570 GLI4P10075 376 aa9.02□□□□□ -0.96
COL4A6-208ENST00000538570 SLC19A1P41440 591 aa9.02□□□□□ -0.96
COL4A6-208ENST00000538570 INPP5JQ15735 1006 aaPredicted RBP9.02□□□□□ -0.96
COL4A6-208ENST00000538570 ZNF124Q15973 351 aa9.02□□□□□ -0.96
COL4A6-208ENST00000538570 AGBL4Q5VU57 503 aa9.02□□□□□ -0.96
COL4A6-208ENST00000538570 ASTLQ6HA08 431 aaPredicted RBP9.02□□□□□ -0.96
COL4A6-208ENST00000538570 YRDCQ86U90 279 aaKnown RBP9.02□□□□□ -0.96
COL4A6-208ENST00000538570 PINX1Q96BK5 328 aaKnown RBP9.02□□□□□ -0.96
COL4A6-208ENST00000538570 ZNF799Q96GE5 643 aa9.02□□□□□ -0.96
COL4A6-208ENST00000538570 S1PR5Q9H228 398 aa9.02□□□□□ -0.96
COL4A6-208ENST00000538570 SIRT3Q9NTG7 399 aaPredicted RBP9.02□□□□□ -0.96
COL4A6-208ENST00000538570 HELTA6NFD8 242 aa9.02□□□□□ -0.97
COL4A6-208ENST00000538570 CDK2AP1O14519 115 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms