RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ELSPBP1Q96BH3 223 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 ESRP2Q9H6T0 727 aaKnown RBP11.34□□□□□ -0.59
VPS52-218ENST00000482399 FN3KRPQ9HA64 309 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 SLC2A4RGQ9NR83 387 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 CUTCQ9NTM9 273 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 EFSO43281 561 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 ADCYAP1P18509 176 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 CLINT1Q14677 625 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 MICBQ29980 383 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 CLEC18BQ6UXF7 455 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 MEX3BQ6ZN04 569 aaKnown RBP11.34□□□□□ -0.59
VPS52-218ENST00000482399 P4HA3Q7Z4N8 544 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 DAZLQ92904 295 aaKnown RBP11.34□□□□□ -0.59
VPS52-218ENST00000482399 PGAM5Q96HS1 289 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 ZNF285Q96NJ3 590 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 URM1Q9BTM9 101 aaKnown RBP11.34□□□□□ -0.59
VPS52-218ENST00000482399 BCL2L14Q9BZR8 327 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 SPACA1Q9HBV2 294 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 GPR84Q9NQS5 396 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 hCG_1809904A0A1W2PP81 198 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 A0A1W2PR64 198 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 A0A1W2PRV1 198 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 CCDC85CA6NKD9 419 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 OR5K4A6NMS3 321 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 POLR2HP52434 150 aaKnown RBP11.34□□□□□ -0.59
VPS52-218ENST00000482399 HSD17B7P56937 341 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 SGCBQ16585 318 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 EIF2S3LQ2VIR3 472 aaKnown RBP11.34□□□□□ -0.59
VPS52-218ENST00000482399 FAM69BQ5VUD6 431 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 LRRC18Q8N456 261 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 SUMF1Q8NBK3 374 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 C11orf40Q8WZ69 217 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 OR5B2Q96R09 309 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 PBOV1Q9GZY1 135 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 ALX4Q9H161 411 aaPredicted RBP11.34□□□□□ -0.59
VPS52-218ENST00000482399 S1PR5Q9H228 398 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 PARPBPQ9NWS1 579 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 CTSFQ9UBX1 484 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 ZNF726A6NNF4 738 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 NPIPB9F8W1W9 429 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 LINC01387J3KSC0 135 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 DUS4LO95620 317 aaKnown RBP11.33□□□□□ -0.6
VPS52-218ENST00000482399 TMEM225BP0DP42 221 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 FCARP24071 287 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 RFC3P40938 356 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 PNLIPRP2P54317 469 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 EIF5AP63241 154 aaKnown RBP11.33□□□□□ -0.6
VPS52-218ENST00000482399 PHLDA2Q53GA4 152 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 CDCP2Q5VXM1 449 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 SLC25A24Q6NUK1 477 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 DRAM2Q6UX65 266 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 FNDC9Q8TBE3 224 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 ST7LQ8TDW4 575 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
VPS52-218ENST00000482399 SLC46A1Q96NT5 459 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 ZNF304Q9HCX3 659 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 SLCO1B1Q9Y6L6 691 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 IGKV1D-43A0A0B4J1Z2 117 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 A6NLC8 198 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 STMND1H3BQB6 276 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 C1QL1O75973 258 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 IL33O95760 270 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 RABIFP47224 123 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 RGS19P49795 217 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 MNX1P50219 401 aaPredicted RBP11.33□□□□□ -0.6
VPS52-218ENST00000482399 BLKP51451 505 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 F2RL1P55085 397 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 SLC26A5P58743 744 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 FABP9Q0Z7S8 132 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 PDCD1Q15116 288 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 TMEM128Q5BJH2 165 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 OR2A2Q6IF42 318 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 CATSPERDQ86XM0 798 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 FAM24BQ8N5W8 94 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 PTPMT1Q8WUK0 201 aaPredicted RBP11.33□□□□□ -0.6
VPS52-218ENST00000482399 C1orf198Q9H425 327 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.33□□□□□ -0.6
VPS52-218ENST00000482399 EYSQ5T1H1 3165 aa11.33□□□□□ -0.6
VPS52-218ENST00000482399 RER1O15258 196 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 CSTBP04080 98 aaKnown RBP11.32□□□□□ -0.6
VPS52-218ENST00000482399 PET100P0DJ07 73 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 CALCRP30988 508 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 FCGR2CP31995 323 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 RPS10P46783 165 aaKnown RBP11.32□□□□□ -0.6
VPS52-218ENST00000482399 ACY1Q03154 408 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 ASPHD2Q6ICH7 369 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 CPEB2Q7Z5Q1 589 aaKnown RBP11.32□□□□□ -0.6
VPS52-218ENST00000482399 SLC22A18ASQ8N1D0 253 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 OR10C1Q96KK4 312 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 MESP1Q9BRJ9 268 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 UTP23Q9BRU9 249 aaKnown RBP11.32□□□□□ -0.6
VPS52-218ENST00000482399 PLEKHJ1Q9NW61 149 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 SVILO95425 2214 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 EIF3GO75821 320 aaKnown RBP eCLIP11.32□□□□□ -0.6
VPS52-218ENST00000482399 OR8U9P0C7N5 309 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 ZNF44P15621 663 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 FBLP22087 321 aaKnown RBP11.32□□□□□ -0.6
VPS52-218ENST00000482399 ABCD3P28288 659 aa11.32□□□□□ -0.6
VPS52-218ENST00000482399 HOXA1P49639 335 aaPredicted RBP11.32□□□□□ -0.6
VPS52-218ENST00000482399 CAV2P51636 162 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms