RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 UCK2Q9BZX2 261 aa4.34□□□□□ -1.71
RBM39-227ENST00000470563 POLR2J2Q9GZM3 115 aaKnown RBP4.34□□□□□ -1.71
RBM39-227ENST00000470563 SPNS1Q9H2V7 528 aa4.34□□□□□ -1.71
RBM39-227ENST00000470563 MCUBQ9NWR8 336 aa4.34□□□□□ -1.71
RBM39-227ENST00000470563 ELOVL2Q9NXB9 296 aa4.34□□□□□ -1.71
RBM39-227ENST00000470563 MAT2BQ9NZL9 334 aa4.34□□□□□ -1.71
RBM39-227ENST00000470563 VPS29Q9UBQ0 182 aa4.34□□□□□ -1.71
RBM39-227ENST00000470563 NUFIP1Q9UHK0 495 aaKnown RBP4.34□□□□□ -1.71
RBM39-227ENST00000470563 GINS2Q9Y248 185 aa4.34□□□□□ -1.71
RBM39-227ENST00000470563 KLF2Q9Y5W3 355 aaPredicted RBP4.34□□□□□ -1.71
RBM39-227ENST00000470563 ALG5Q9Y673 324 aa4.34□□□□□ -1.71
RBM39-227ENST00000470563 NUP210LQ5VU65 1888 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 DENND4AQ7Z401 1863 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 IGLV3-16A0A075B6K0 115 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 A0A0G2JMP0 313 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 A0A0U1RQS6 177 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 A0A1W2PQL4 384 aaPredicted RBP4.33□□□□□ -1.72
RBM39-227ENST00000470563 GSAPA4D1B5 854 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 MFSD2BA6NFX1 497 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 KRBOX1C9JBD0 128 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 PPIAL4DF5H284 164 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 INMT-MINDY4F8WBC2 141 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 PDHXO00330 501 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 CASC3O15234 703 aaKnown RBP4.33□□□□□ -1.72
RBM39-227ENST00000470563 PLA2G10O15496 165 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 ZG16O60844 167 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 OR7A10O76100 309 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 B3GAT3O94766 335 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 SLC25A14O95258 325 aaPredicted RBP4.33□□□□□ -1.72
RBM39-227ENST00000470563 SEMA4FO95754 770 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 SNAI1O95863 264 aaPredicted RBP4.33□□□□□ -1.72
RBM39-227ENST00000470563 TRBC1P01850 177 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 HLA-DPB1P04440 258 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 ZDHHC11BP0C7U3 371 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 UGT2B7P16662 529 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 ATF6P18850 670 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 PAICSP22234 425 aaKnown RBP4.33□□□□□ -1.72
RBM39-227ENST00000470563 TGFBR1P36897 503 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 IFNGR2P38484 337 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 CDKN2CP42773 168 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 BRCC3P46736 316 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 EVX1P49640 407 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 ETV1P50549 477 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 PPT1P50897 306 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 XKP51811 444 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 ZNF763Q0D2J5 394 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 GPM6BQ13491 265 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 FCN2Q15485 313 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 GRK1Q15835 563 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 EXOC3L2Q2M3D2 409 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 C10orf120Q5SQS8 335 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 C9orf66Q5T8R8 295 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 ASPHD2Q6ICH7 369 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 PYHIN1Q6K0P9 492 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 TEX261Q6UWH6 196 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 ZNF621Q6ZSS3 439 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 VASH2Q86V25 355 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 TPRA1Q86W33 373 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 SERPINA9Q86WD7 417 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 LRRC28Q86X40 367 aaPredicted RBP4.33□□□□□ -1.72
RBM39-227ENST00000470563 SLC34A3Q8N130 599 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 Q8N402 240 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 C9orf62Q8N4C0 152 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 EID2Q8N6I1 236 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 OR52M1Q8NGK5 317 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 OR52N1Q8NH53 320 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 CXorf40AQ8TE69 158 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 SPRYD4Q8WW59 207 aaPredicted RBP4.33□□□□□ -1.72
RBM39-227ENST00000470563 UCN3Q969E3 161 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 FBXO32Q969P5 355 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 RBM18Q96H35 190 aaKnown RBP4.33□□□□□ -1.72
RBM39-227ENST00000470563 SLC38A2Q96QD8 506 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 CHCHD5Q9BSY4 110 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 MED28Q9H204 178 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 MIXL1Q9H2W2 232 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 ANKRD19PQ9H560 264 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 JPT2Q9H910 190 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 CALHM2Q9HA72 323 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 ELL3Q9HB65 397 aaPredicted RBP4.33□□□□□ -1.72
RBM39-227ENST00000470563 ABCB9Q9NP78 766 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 ACER3Q9NUN7 267 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 TXNL4BQ9NX01 149 aaKnown RBP4.33□□□□□ -1.72
RBM39-227ENST00000470563 MUTYHQ9UIF7 546 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 CRLS1Q9UJA2 301 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 MGAT4AQ9UM21 535 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 HSPB11Q9Y547 144 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 NUBP2Q9Y5Y2 271 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 PRSS21Q9Y6M0 314 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 CDH10Q9Y6N8 788 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 U3KQ87 197 aa4.33□□□□□ -1.72
RBM39-227ENST00000470563 TCF20Q9UGU0 1960 aaKnown RBP4.33□□□□□ -1.72
RBM39-227ENST00000470563 THSD7BQ9C0I4 1608 aa4.32□□□□□ -1.72
RBM39-227ENST00000470563 GLYATL1P3A0A0U1RQE8 302 aa4.32□□□□□ -1.72
RBM39-227ENST00000470563 MGAT4DA6NG13 374 aa4.32□□□□□ -1.72
RBM39-227ENST00000470563 H7C423 109 aa4.32□□□□□ -1.72
RBM39-227ENST00000470563 GFYI3L273 518 aa4.32□□□□□ -1.72
RBM39-227ENST00000470563 FOXE1O00358 373 aaPredicted RBP4.32□□□□□ -1.72
RBM39-227ENST00000470563 BTN3A3O00478 584 aa4.32□□□□□ -1.72
RBM39-227ENST00000470563 CHP2O43745 196 aa4.32□□□□□ -1.72
RBM39-227ENST00000470563 OR1I1O60431 355 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms