RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 OR52H1Q8NGJ2 320 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 OR51A4Q8NGJ6 313 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 RPL3LQ92901 407 aaKnown RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 ITFG2Q969R8 447 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 APOBEC3DQ96AK3 386 aaPredicted RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 DGCR14Q96DF8 476 aaKnown RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 CMBLQ96DG6 245 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 SMIM19Q96E16 107 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 MARS2Q96GW9 593 aaKnown RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 ZC3HAV1LQ96H79 300 aaKnown RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 PGAM5Q96HS1 289 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 DOK1Q99704 481 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 TMEM204Q9BSN7 226 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 RBM38Q9H0Z9 239 aaKnown RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 ZCCHC4Q9H5U6 513 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 SP140LQ9H930 580 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 MOV10Q9HCE1 1003 aaKnown RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 TRIM36Q9NQ86 728 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 TUBG2Q9NRH3 451 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 ZNF275Q9NSD4 429 aaPredicted RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 NDUFB11Q9NX14 153 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 EIF3KQ9UBQ5 218 aaKnown RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 V9GYS6 101 aa5.12□□□□□ -1.59
USP39-213ENST00000467885 NCOA6Q14686 2063 aaPredicted RBP5.12□□□□□ -1.59
USP39-213ENST00000467885 ARHGAP21Q5T5U3 1957 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 SMG1Q96Q15 3661 aaKnown RBP5.11□□□□□ -1.59
USP39-213ENST00000467885 TRBV5-7A0A0A0MS05 114 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 A0A1W2PPK0 400 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 SHISA3A0PJX4 238 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 TRIM64BA6NI03 449 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 TMEM212A6NML5 194 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 DEFB108AA8MXU0 73 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 SHISA9B4DS77 424 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 ZNF879B4DU55 563 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 CASKO14936 926 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 SMPD2O60906 423 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 ATE1O95260 518 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 CLDN1O95832 211 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 PLAUP00749 431 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 CRYAAP02489 173 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 HLA-DPB1P04440 258 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 ANXA2P07355 339 aaKnown RBP5.11□□□□□ -1.59
USP39-213ENST00000467885 FAM157BP0CG42 384 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 ACKR3P25106 362 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 GABRA5P31644 462 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 THBS4P35443 961 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 GLRXP35754 106 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 FABP6P51161 128 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 TMBIM6P55061 237 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 ERVS71-1P61550 626 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 PPP1CBP62140 327 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 BSPH1Q075Z2 132 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 PSG7Q13046 419 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 GK2Q14410 553 aaPredicted RBP5.11□□□□□ -1.59
USP39-213ENST00000467885 HLXQ14774 488 aaPredicted RBP5.11□□□□□ -1.59
USP39-213ENST00000467885 ODF4Q2M2E3 257 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 MST1LQ2TV78 715 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 ZNF829Q3KNS6 432 aaPredicted RBP5.11□□□□□ -1.59
USP39-213ENST00000467885 YIF1BQ5BJH7 314 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 CEP78Q5JTW2 689 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 FOXB2Q5VYV0 432 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 ZNF529Q6P280 563 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 TMEM108Q6UXF1 575 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 FBXW12Q6X9E4 464 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 GDPGP1Q6ZNW5 385 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 FAM220AQ7Z4H9 259 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 GPR141Q7Z602 305 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 CEACAM19Q7Z692 300 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 C1orf174Q8IYL3 243 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 OR5L1Q8NGL2 311 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 OR13C5Q8NGS8 318 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 OR2AE1Q8NHA4 323 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 SLC25A40Q8TBP6 338 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 KLF14Q8TD94 323 aaPredicted RBP5.11□□□□□ -1.59
USP39-213ENST00000467885 GPR148Q8TDV2 347 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 SSC4DQ8WTU2 575 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 FAM222BQ8WU58 562 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 TMEM171Q8WVE6 324 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 UFD1Q92890 307 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 FGGYQ96C11 551 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 ORAI1Q96D31 301 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 ADAT3Q96EY9 351 aaPredicted RBP5.11□□□□□ -1.59
USP39-213ENST00000467885 LRRC46Q96FV0 321 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 PLPPR2Q96GM1 343 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 SLC30A2Q9BRI3 323 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 CENPOQ9BU64 300 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 MED18Q9BUE0 208 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 TMED9Q9BVK6 235 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 OR10A2Q9H208 303 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 RNF167Q9H6Y7 350 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 PPP1R3EQ9H7J1 279 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 CDH20Q9HBT6 801 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 VCX3AQ9NNX9 186 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 NGBQ9NPG2 151 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 GPR84Q9NQS5 396 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 BATF3Q9NR55 127 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 TXNL4BQ9NX01 149 aaKnown RBP5.11□□□□□ -1.59
USP39-213ENST00000467885 CRIM1Q9NZV1 1036 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 HHLA2Q9UM44 414 aa5.11□□□□□ -1.59
USP39-213ENST00000467885 KLF2Q9Y5W3 355 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms