RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 CELF2-AS1Q8N7Q2 184 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 STMN2Q93045 179 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 SPSB4Q96A44 273 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 AMELYQ99218 206 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 MNTQ99583 582 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 MROQ9BYG7 248 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 RGCCQ9H4X1 137 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 S100A14Q9HCY8 104 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 BRD7Q9NPI1 651 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 USE1Q9NZ43 259 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 MRPL15Q9P015 296 aaKnown RBP12.63□□□□□ -0.39
ATG4B-213ENST00000460211 NPTNQ9Y639 398 aa12.63□□□□□ -0.39
ATG4B-213ENST00000460211 ANK2Q01484 3957 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-213ENST00000460211 ANKRD30BLA7E2S9 258 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 F5H5P2 479 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 H0YL77 283 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 HAX1O00165 279 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 PHYHO14832 338 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 ZNF254O75437 659 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 HLA-DPB1P04440 258 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 MRPL3P09001 348 aaKnown RBP12.62□□□□□ -0.39
ATG4B-213ENST00000460211 SBK2P0C263 348 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 IRF2P14316 349 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 POLR2IP36954 125 aaKnown RBP12.62□□□□□ -0.39
ATG4B-213ENST00000460211 ALDH3A2P51648 485 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 PRSS12P56730 875 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 LMO4P61968 165 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 SPRNQ5BIV9 151 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 LRRN1Q6UXK5 716 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 GLCCI1Q86VQ1 547 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 KLBQ86Z14 1044 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 C1orf87Q8N0U7 546 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 SPERTQ8NA61 448 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 OR8J1Q8NGP2 316 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 OR51F2Q8NH61 342 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 TRUB1Q8WWH5 349 aaKnown RBP12.62□□□□□ -0.39
ATG4B-213ENST00000460211 ERGIC1Q969X5 290 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 SGK3Q96BR1 496 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 REEP6Q96HR9 211 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 SOX7Q9BT81 388 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 C9orf16Q9BUW7 83 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 ZNF665Q9H7R5 613 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 GCM1Q9NP62 436 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 IMPAD1Q9NX62 359 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 WARS2Q9UGM6 360 aaKnown RBP12.62□□□□□ -0.39
ATG4B-213ENST00000460211 ZNF391Q9UJN7 358 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 PCDHB10Q9UN67 800 aa12.62□□□□□ -0.39
ATG4B-213ENST00000460211 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.61□□□□□ -0.397e-10■■■■□ 20.1
ATG4B-213ENST00000460211 A0A1B0GWJ7 208 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 ACOD1A6NK06 481 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 ZNF670-ZNF695F2Z2N8 137 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 EI24O14681 340 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 WNT9BO14905 357 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 MLNRO43193 412 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 ALPLP05186 524 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 MSMBP08118 114 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 CA6P23280 308 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 ATP6V1E1P36543 226 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 HCCSP53701 268 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 DVL1P1P54792 670 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-213ENST00000460211 PSMA6P60900 246 aaKnown RBP12.61□□□□□ -0.39
ATG4B-213ENST00000460211 GFOD2Q3B7J2 385 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 BCDIN3DQ7Z5W3 292 aaKnown RBP12.61□□□□□ -0.39
ATG4B-213ENST00000460211 FTMTQ8N4E7 242 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 KLHL36Q8N4N3 616 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 CBR4Q8N4T8 237 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 SPICQ8N5J4 248 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 OR56B2PQ8NGI1 322 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 OR11L1Q8NGX0 322 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 RFKQ969G6 155 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 ADAT1Q9BUB4 502 aaKnown RBP12.61□□□□□ -0.39
ATG4B-213ENST00000460211 HAO2Q9NYQ3 351 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 LRP12Q9Y561 859 aa12.61□□□□□ -0.39
ATG4B-213ENST00000460211 YLPM1P49750 1951 aaKnown RBP12.61□□□□□ -0.39
ATG4B-213ENST00000460211 C5orf63A6NC05 138 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 TMEM178BH3BS89 294 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 M0R129 80 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 BAG2O95816 211 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 DCTDP32321 178 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 CD200P41217 278 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 GATA4P43694 442 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 RIDAP52758 137 aaKnown RBP12.6□□□□□ -0.39
ATG4B-213ENST00000460211 BTG1P62324 171 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 FAM3AP98173 230 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 ROM1Q03395 351 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 POU4F2Q12837 409 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 TMED1Q13445 227 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 ZNF181Q2M3W8 571 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 ZNF829Q3KNS6 432 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-213ENST00000460211 TMEM155Q4W5P6 130 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 ZBTB49Q6ZSB9 765 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 PRSS45Q7RTY3 260 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 MOGAT3Q86VF5 341 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 SLC35F2Q8IXU6 374 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 ZNF679Q8IYX0 411 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 PQLC1Q8N2U9 271 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 MUC20Q8N307 709 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-213ENST00000460211 PLPP7Q8NBV4 271 aa12.6□□□□□ -0.39
ATG4B-213ENST00000460211 CSNK2A3Q8NEV1 391 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms