RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 AMELYQ99218 206 aa17.31■□□□□ 0.36
SDC1-205ENST00000447124 MRI1Q9BV20 369 aa17.31■□□□□ 0.36
SDC1-205ENST00000447124 SLC22A4Q9H015 551 aa17.31■□□□□ 0.36
SDC1-205ENST00000447124 IGHV2-70DA0A0C4DH43 119 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 KIR2DS1A0A191URI9 304 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 AQP12BA6NM10 295 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 RIIAD1A6NNX1 92 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 ZNF878C9JN71 531 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 IRF2P14316 349 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 BLVRAP53004 296 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 UBA52P62987 128 aaKnown RBP17.3■□□□□ 0.36
SDC1-205ENST00000447124 ACTG1P63261 375 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 EIF2B1Q14232 305 aaKnown RBP17.3■□□□□ 0.36
SDC1-205ENST00000447124 GK3PQ14409 553 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 WDR25Q64LD2 544 aaPredicted RBP17.3■□□□□ 0.36
SDC1-205ENST00000447124 DOK3Q7L591 496 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 PRSS45Q7RTY3 260 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 DPY19L4Q7Z388 723 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 AQP12AQ8IXF9 295 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 HS3ST5Q8IZT8 346 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 OR56B2PQ8NGI1 322 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 OR11L1Q8NGX0 322 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 C1orf147Q96MC9 270 aaPredicted RBP17.3■□□□□ 0.36
SDC1-205ENST00000447124 ADAT1Q9BUB4 502 aaKnown RBP17.3■□□□□ 0.36
SDC1-205ENST00000447124 ABHD6Q9BV23 337 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 MARCH7Q9H992 704 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 NTN4Q9HB63 628 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 MRPL15Q9P015 296 aaKnown RBP17.3■□□□□ 0.36
SDC1-205ENST00000447124 PDP1Q9P0J1 537 aaPredicted RBP17.3■□□□□ 0.36
SDC1-205ENST00000447124 ZNF319Q9P2F9 582 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 RNF7Q9UBF6 113 aa17.3■□□□□ 0.36
SDC1-205ENST00000447124 IGHV3OR16-10A0A075B7F0 116 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 H3BN98 237 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 GLCEO94923 617 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 IGHV4-38-2P0DP08 117 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 ZNF3P17036 446 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 PRKACGP22612 351 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 GSTT1P30711 240 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 PSMB10P40306 273 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 PITPNBP48739 271 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 GINS1Q14691 196 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 SFRP4Q6FHJ7 346 aaPredicted RBP17.29■□□□□ 0.36
SDC1-205ENST00000447124 LRRN1Q6UXK5 716 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 DCDC5Q6ZRR9 648 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 ZNF826PQ6ZT77 177 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 ERI1Q8IV48 349 aaKnown RBP17.29■□□□□ 0.36
SDC1-205ENST00000447124 TIGD4Q8IY51 512 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 OR8B3Q8NGG8 313 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 OR6N2Q8NGY6 317 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 TEX47Q8TBZ9 253 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 RNF133Q8WVZ7 376 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 OTULINQ96BN8 352 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 PLEKHA8Q96JA3 519 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 OR8B2Q96RD0 313 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 INTS14Q96SY0 518 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 OR51V1Q9H2C8 321 aa17.29■□□□□ 0.36
SDC1-205ENST00000447124 ARRDC5A6NEK1 342 aa17.28■□□□□ 0.36
SDC1-205ENST00000447124 POU1F1P28069 291 aa17.28■□□□□ 0.36
SDC1-205ENST00000447124 CX3CR1P49238 355 aa17.28■□□□□ 0.36
SDC1-205ENST00000447124 GRB2P62993 217 aaKnown RBP17.28■□□□□ 0.36
SDC1-205ENST00000447124 FAM3AP98173 230 aa17.28■□□□□ 0.36
SDC1-205ENST00000447124 SLC16A9Q7RTY1 509 aa17.28■□□□□ 0.36
SDC1-205ENST00000447124 C11orf53Q8IXP5 236 aa17.28■□□□□ 0.36
SDC1-205ENST00000447124 BOLLQ8N9W6 283 aaKnown RBP17.28■□□□□ 0.36
SDC1-205ENST00000447124 PLPP7Q8NBV4 271 aa17.28■□□□□ 0.36
SDC1-205ENST00000447124 UPRTQ96BW1 309 aa17.28■□□□□ 0.36
SDC1-205ENST00000447124 DUX5Q96PT3 197 aa17.28■□□□□ 0.36
SDC1-205ENST00000447124 PPP1R3EQ9H7J1 279 aa17.28■□□□□ 0.36
SDC1-205ENST00000447124 FN3KRPQ9HA64 309 aa17.28■□□□□ 0.36
SDC1-205ENST00000447124 CTSZQ9UBR2 303 aa17.28■□□□□ 0.36
SDC1-205ENST00000447124 NOP16Q9Y3C1 178 aaKnown RBP17.28■□□□□ 0.36
SDC1-205ENST00000447124 C22orf46C9J442 243 aa17.27■□□□□ 0.36
SDC1-205ENST00000447124 LGALS8O00214 317 aa17.27■□□□□ 0.36
SDC1-205ENST00000447124 TBX1O43435 398 aa17.27■□□□□ 0.36
SDC1-205ENST00000447124 GRPP07492 148 aa17.27■□□□□ 0.36
SDC1-205ENST00000447124 PPIAL4GP0DN37 164 aa17.27■□□□□ 0.36
SDC1-205ENST00000447124 SLC15A1P46059 708 aa17.27■□□□□ 0.36
SDC1-205ENST00000447124 KLHL12Q53G59 568 aa17.27■□□□□ 0.36
SDC1-205ENST00000447124 BTNL3Q6UXE8 466 aa17.27■□□□□ 0.36
SDC1-205ENST00000447124 TRPM8Q7Z2W7 1104 aa17.27■□□□□ 0.36
SDC1-205ENST00000447124 SLC7A6OSQ96CW6 309 aaPredicted RBP17.27■□□□□ 0.36
SDC1-205ENST00000447124 ZMYND19Q96E35 227 aaPredicted RBP17.27■□□□□ 0.36
SDC1-205ENST00000447124 NUDT16L1Q9BRJ7 211 aaKnown RBP17.27■□□□□ 0.36
SDC1-205ENST00000447124 C1orf123Q9NWV4 160 aa17.27■□□□□ 0.36
SDC1-205ENST00000447124 FAM53CQ9NYF3 392 aa17.27■□□□□ 0.36
SDC1-205ENST00000447124 CLN8Q9UBY8 286 aa17.27■□□□□ 0.36
SDC1-205ENST00000447124 C3orf80F5H4A9 247 aa17.26■□□□□ 0.35
SDC1-205ENST00000447124 GNGT2O14610 69 aa17.26■□□□□ 0.35
SDC1-205ENST00000447124 XRCC2O43543 280 aa17.26■□□□□ 0.35
SDC1-205ENST00000447124 FCN3O75636 299 aa17.26■□□□□ 0.35
SDC1-205ENST00000447124 ANXA2P07355 339 aaKnown RBP17.26■□□□□ 0.35
SDC1-205ENST00000447124 DDOSTP39656 456 aa17.26■□□□□ 0.35
SDC1-205ENST00000447124 OPRL1P41146 370 aa17.26■□□□□ 0.35
SDC1-205ENST00000447124 CDK5Q00535 292 aa17.26■□□□□ 0.35
SDC1-205ENST00000447124 PLBD1Q6P4A8 553 aa17.26■□□□□ 0.35
SDC1-205ENST00000447124 FAM57BQ71RH2 274 aa17.26■□□□□ 0.35
SDC1-205ENST00000447124 NLRC3Q7RTR2 1065 aa17.26■□□□□ 0.35
SDC1-205ENST00000447124 WDR86Q86TI4 376 aa17.26■□□□□ 0.35
SDC1-205ENST00000447124 GCSAMQ8N6F7 178 aa17.26■□□□□ 0.35
SDC1-205ENST00000447124 SPERTQ8NA61 448 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms