RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 ZDHHC4Q9NPG8 344 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 RXFP3Q9NSD7 469 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 CBLN4Q9NTU7 201 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 BET1LQ9NYM9 111 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 TAAR2Q9P1P5 351 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 UQCR10Q9UDW1 63 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZNF230Q9UIE0 474 aaPredicted RBP5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 MSRAQ9UJ68 235 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 SERTAD3Q9UJW9 196 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 RAB22AQ9UL26 194 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 RPH3ALQ9UNE2 315 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 WSB1Q9Y6I7 421 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 MGAMO43451 1857 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 UBR3Q6ZT12 1888 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 MYO16Q9Y6X6 1858 aa5.04□□□□□ -1.6
VTI1BP4-201ENST00000427516 SMCHD1A6NHR9 2005 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 TRBV5-7A0A0A0MS05 114 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 TGIF2-C20orf24A0A0A6YYL0 155 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 SMIM35A0A1B0GVV1 85 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 A0A1W2PQH9 124 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 OR2AG2A6NM03 316 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 DHRS7CA6NNS2 312 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZNF705FA8MVS1 300 aaPredicted RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 TMEM238C9JI98 176 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 PEX12O00623 359 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 DEDDO75618 318 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 NDUFB2O95178 105 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 IGSF6O95976 241 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 TOMM40O96008 361 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 IGLV3-27P01718 113 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 LGALS2P05162 132 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 KLK1P06870 262 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 C8AP07357 584 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 GJB1P08034 283 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 MRPL3P09001 348 aaKnown RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZNF705DP0CH99 300 aaPredicted RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZNF705BP0CI00 300 aaPredicted RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 GIMD1P0DJR0 217 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 OR13C7P0DN81 318 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 LIPCP11150 499 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 LAMP2P13473 410 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 IRF2P14316 349 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 ELNP15502 786 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 AKR1C4P17516 323 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 HOXD9P28356 352 aaPredicted RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 HSD11B1P28845 292 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 FCGR2CP31995 323 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 ACVRL1P37023 503 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 SRP14P37108 136 aaKnown RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 NAA10P41227 235 aaPredicted RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 TSFMP43897 325 aaKnown RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 GABRA2P47869 451 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 CSNK1A1P48729 337 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 THBS3P49746 956 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 PRKAG1P54619 331 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 ERVFRD-1P60508 538 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 LCN6P62502 163 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 POLR2LP62875 67 aaKnown RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 MEF2AQ02078 507 aaPredicted RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZP2Q05996 745 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 SPEM2Q0P670 501 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 PMS2P11Q13670 270 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 ENPP2Q13822 863 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 GNMTQ14749 295 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZXDCQ2QGD7 858 aaPredicted RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 ACSF3Q4G176 576 aaPredicted RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 TCEAL5Q5H9L2 206 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 VAX1Q5SQQ9 334 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 C10orf120Q5SQS8 335 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 PIP5KL1Q5T9C9 394 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 RPL7L1Q6DKI1 246 aaKnown RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 DPY19L2P2Q6ZN68 376 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 SLC16A9Q7RTY1 509 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 LINC01551Q86U37 167 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 RBM45Q8IUH3 476 aaKnown RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 H1FOOQ8IZA3 346 aaPredicted RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 PNKDQ8N490 385 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 CSNK1A1LQ8N752 337 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 TCTEX1D1Q8N7M0 179 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 NOXO1Q8NFA2 376 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 OR51A2Q8NGJ7 313 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 ZCCHC14Q8WYQ9 949 aaKnown RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 AQP3Q92482 292 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 FRZBQ92765 325 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 HAS2Q92819 552 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 CDS1Q92903 461 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 EMG1Q92979 244 aaKnown RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 MCHR2Q969V1 340 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 RELTQ969Z4 430 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 PLD4Q96BZ4 506 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 DDIT4LQ96D03 193 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 ANAPC16Q96DE5 110 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 GMPPAQ96IJ6 420 aaPredicted RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 CIB3Q96Q77 187 aaPredicted RBP5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 TIMP4Q99727 224 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 GPA33Q99795 319 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 SYT3Q9BQG1 590 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 ORAI3Q9BRQ5 295 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 RNF126Q9BV68 326 aa5.03□□□□□ -1.6
VTI1BP4-201ENST00000427516 PARD6GQ9BYG4 376 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms