RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 GNG8Q9UK08 70 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 IKZF2Q9UKS7 526 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF346Q9UL40 294 aaKnown RBP3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 STUB1Q9UNE7 303 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 SSR3Q9UNL2 185 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 GTF2A1LQ9UNN4 478 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 RASD1Q9Y272 281 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 B3GALT5Q9Y2C3 310 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 GSTK1Q9Y2Q3 226 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 POLR1DQ9Y2S0 133 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 CAB39Q9Y376 341 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 FKBP7Q9Y680 259 aa3.32□□□□□ -1.88
HMGB3P20-201ENST00000417997 IGHV3-15A0A0B4J1V0 119 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 PRSS37A4D1T9 235 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 PINLYPA6NC86 204 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 TRABD2BA6NFA1 517 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 TVP23AA6NH52 213 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF726A6NNF4 738 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 FAM166BA8MTA8 275 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 VGLL3A8MV65 326 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 B4DXG7 233 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 AHCYL1O43865 530 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 NME2P1O60361 137 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC16A7O60669 478 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 EIF1BO60739 113 aaKnown RBP3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 KHDRBS3O75525 346 aaKnown RBP3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 SYNGR4O95473 234 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 IGHG1P01857 330 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 KRT8P05787 483 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 ADRA2AP08913 450 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 TACSTD2P09758 323 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR2T7P0C7T2 308 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 LIMS3P0CW19 117 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 LIMS4P0CW20 117 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF182P17025 639 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 CELP19835 753 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 EDN2P20800 178 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 PAX7P23759 505 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 MYL9P24844 172 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 EDNRAP25101 427 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 SHC1P29353 583 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 GABRA5P31644 462 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 CD79BP40259 229 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 RFC3P40938 356 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 CCL11P51671 97 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 BIDP55957 195 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 CLDN17P56750 224 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 RPS3AP61247 264 aaKnown RBP3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 NCS1P62166 190 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 BDH1Q02338 343 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF85Q03923 595 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 GLO1Q04760 184 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 MRPL28Q13084 256 aaKnown RBP3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 SRSF6Q13247 344 aaKnown RBP3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 DYNC1I2Q13409 638 aaKnown RBP3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 AQP6Q13520 282 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 EIF2B1Q14232 305 aaKnown RBP3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 SPCS2Q15005 226 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 TRAM1Q15629 374 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 SSX1Q16384 188 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 CTF1Q16619 201 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 MRGPRG-AS1Q2M3A8 158 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 DEFB109BQ30KR1 87 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 TP53I3Q53FA7 332 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF766Q5HY98 468 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 CARD17Q5XLA6 110 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 HBMQ6B0K9 141 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 SPINK14Q6IE38 97 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC25A25Q6KCM7 469 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 ARL9Q6T311 187 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF322Q6U7Q0 402 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 GDPGP1Q6ZNW5 385 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 PLEKHG7Q6ZR37 379 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 TMPPEQ6ZT21 453 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 FOXL2NBQ6ZUU3 175 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 CHMP1BQ7LBR1 199 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC16A9Q7RTY1 509 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 PXKQ7Z7A4 578 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 SLC22A16Q86VW1 577 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 SYS1Q8N2H4 156 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 KDM8Q8N371 416 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 ARIH2OSQ8N7S6 290 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 YIPF7Q8N8F6 280 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 SYT14Q8NB59 555 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 FAM83FQ8NEG4 500 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR6N1Q8NGY5 312 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR2T27Q8NH04 317 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 OR2V1Q8NHB1 315 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 ZNF519Q8TB69 540 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 NDNFQ8TB73 568 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 FNDC8Q8TC99 324 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 HAVCR2Q8TDQ0 301 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 THEM6Q8WUY1 208 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 PSMF1Q92530 271 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 TM9SF4Q92544 642 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 NSMAFQ92636 917 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 RND1Q92730 232 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 RPL3LQ92901 407 aaKnown RBP3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 PTP4A1Q93096 173 aa3.31□□□□□ -1.88
HMGB3P20-201ENST00000417997 OXGR1Q96P68 337 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms